RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 SLC13A3Q8WWT9 602 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 DNASE1L2Q92874 299 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 MTFMTQ96DP5 389 aaKnown RBP13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 ERLEC1Q96DZ1 483 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 MED8Q96G25 268 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 RSRC1Q96IZ7 334 aaKnown RBP13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 HHIPQ96QV1 700 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 LGR4Q9BXB1 951 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 TRIM15Q9C019 465 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 WDR26Q9H7D7 661 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 RMI1Q9H9A7 625 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 MBNL1Q9NR56 388 aaKnown RBP13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 PHPT1Q9NRX4 125 aaPredicted RBP13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 PCDHGA11Q9Y5H2 935 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 PCYT1BQ9Y5K3 369 aaPredicted RBP13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 TNRC18O15417 2968 aaPredicted RBP13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 AQP12BA6NM10 295 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 EGFP01133 1207 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 DNTTP04053 509 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 AMD1P17707 334 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 HNRNPFP52597 415 aaKnown RBP13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 TBPL1P62380 186 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 TAP2Q03519 686 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 INPP5AQ14642 412 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 SLC44A4Q53GD3 710 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 OGFRL1Q5TC84 451 aaPredicted RBP13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 LCN8Q6JVE9 175 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 NANOGP8Q6NSW7 305 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 SLC2A7Q6PXP3 512 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 EP400NLQ6ZTU2 488 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 SPATA24Q86W54 205 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 AQP12AQ8IXF9 295 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 KBTBD2Q8IY47 623 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 OR8J3Q8NGG0 315 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 SETD7Q8WTS6 366 aaKnown RBP13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 RAD51AP1Q96B01 352 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 TESCQ96BS2 214 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 C1QTNF7Q9BXJ2 289 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 NANOGQ9H9S0 305 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 PREBQ9HCU5 417 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 ACTR3BQ9P1U1 418 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 SLC23A2Q9UGH3 650 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 CD207Q9UJ71 328 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 RIMS3Q9UJD0 308 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 FZD4Q9ULV1 537 aa13.87□□□□□ -0.19
RTFDC1-201ENST00000023939 PRMT3O60678 531 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 KCNJ13O60928 360 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 RPN2P04844 631 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 ERGP11308 486 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 MYCLP1P12525 358 aaPredicted RBP13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 HOXB2P14652 356 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 NPPBP16860 134 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 KELP23276 732 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 SLC7A1P30825 629 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 HSD17B2P37059 387 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 DGKQP52824 942 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 C21orf58P58505 322 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 SGCGQ13326 291 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 ADGRE1Q14246 886 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 ARHGAP19Q14CB8 494 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 ATG9BQ674R7 924 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 MSANTD1Q6ZTZ1 278 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 USP30Q70CQ3 517 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 HORMAD1Q86X24 394 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 CACUL1Q86Y37 369 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 DCUN1D3Q8IWE4 304 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 SYTL1Q8IYJ3 562 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 REPS1Q96D71 796 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 C11orf24Q96F05 449 aaPredicted RBP13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 UHRF1Q96T88 793 aaPredicted RBP13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 CGREF1Q99674 301 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 ECSITQ9BQ95 431 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 EFCAB11Q9BUY7 163 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 VPS29Q9UBQ0 182 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 ACSL5Q9ULC5 683 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 DLGAP4Q9Y2H0 992 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 LRCH1Q9Y2L9 728 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 AP3M1Q9Y2T2 418 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 TSC22D4Q9Y3Q8 395 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 MYO9BQ13459 2157 aa13.86□□□□□ -0.19
RTFDC1-201ENST00000023939 A0A1W2PQU0 124 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 PI15O43692 258 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 KLF8O95600 359 aaPredicted RBP13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 PAK4O96013 591 aaPredicted RBP13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 PGRP06401 933 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 SDC1P18827 310 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 COL9A1P20849 921 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 HTR1EP28566 365 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 GSK3BP49841 420 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 ADPRHP54922 357 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 YBX1P67809 324 aaKnown RBP13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 LIPEQ05469 1076 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 GRSF1Q12849 480 aaKnown RBP eCLIP13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 FAM174BQ3ZCQ3 159 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 RABL3Q5HYI8 236 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 HABP4Q5JVS0 413 aaKnown RBP13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 DOK6Q6PKX4 331 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 RIMKLAQ8IXN7 391 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 OR2T34Q8NGX1 318 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 DNAJB14Q8TBM8 379 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms