RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 Tmprss4Q8VCA5 435 aa13.1□□□□□ -0.31
Vps35-201ENSMUST00000034131 MpstQ99J99 297 aa13.1□□□□□ -0.31
Vps35-201ENSMUST00000034131 OoepQ9CWE6 164 aa13.1□□□□□ -0.31
Vps35-201ENSMUST00000034131 BC024063A0A1W2P7G7 749 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Kctd18E0CZ26 429 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Odc1P00860 461 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Ptger3P30557 365 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Igfbp3P47878 292 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Slc26a10Q5EBI0 492 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Znrf3Q5SSZ7 913 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Arl5cQ6P068 179 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 RragdQ7TT45 449 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Reep1Q8BGH4 201 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Pou6f2Q8BJI4 691 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Hsdl1Q8BTX9 330 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 C1qtnf7Q8BVD7 289 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Dnajc22Q8CHS2 339 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 H2afjQ8R1M2 129 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Smim14Q91VT8 99 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Chil4Q91Z98 402 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Ola1Q9CZ30 396 aaKnown RBP13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 3110001I22RikQ9CZ70 312 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Clic1Q9Z1Q5 241 aaKnown RBP13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 PatjQ63ZW7 1834 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Sned1Q70E20 1403 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Prom1O54990 867 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 WarsP32921 481 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Trappc3lQ4KL14 181 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Bcap29Q61334 240 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Sdr16c5Q7TQA3 309 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Q8BGK9 164 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Tmem125Q8CHQ6 216 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Cyp51a1Q8K0C4 503 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 PolbQ8K409 335 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 RbksQ8R1Q9 323 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Etv3Q8R4Z4 513 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Ptgr2Q8VDQ1 351 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 AmnQ99JB7 458 aaKnown RBP13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Sytl2Q99N50 950 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Xylt2Q9EPL0 865 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Smad9Q9JIW5 430 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Pole3Q9JKP7 145 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Epb41l4bQ9JMC8 527 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Zfp985A2A7A5 519 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Olfr172E9Q8F6 309 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Ncam2O35136 837 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 JchainP01592 159 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Ap2s1P62743 142 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Gdf9Q07105 441 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Gm5113Q3UGK8 141 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Fam109aQ8BH49 266 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Vmn1r206Q8R277 312 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Olfr669Q8VGU9 317 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Cdhr1Q8VHP6 859 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Themis3Q9CU24 569 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Chrm3Q9ERZ3 589 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Prss16Q9QXE5 509 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Bmp10Q9R229 421 aa13.09□□□□□ -0.31
Vps35-201ENSMUST00000034131 Adh6bA0A1D5RMB0 384 aa13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 Mroh7A2AVR2 1279 aa13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 Zfp788E9Q980 884 aa13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 Gm8879F6R3J9 157 aa13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 Gosr2O35166 212 aa13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 Npc1O35604 1277 aa13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 Cops5O35864 334 aa13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 Nr4a1P12813 601 aa13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 NppbP40753 121 aa13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 HccsP53702 272 aa13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 Rars2Q3U186 578 aa13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 Fblim1Q71FD7 375 aa13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 Suz12Q80U70 741 aaKnown RBP13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 Cox10Q8CFY5 443 aa13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 PvrQ8K094 408 aa13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 Vmn1r38Q8R2E1 302 aa13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 Utp4Q8R2N2 686 aaKnown RBP13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 Hip1Q8VD75 1029 aaKnown RBP13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 GhdcQ99J23 532 aa13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 Klhdc8bQ9D2D9 354 aa13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 Loxl3Q9Z175 754 aa13.08□□□□□ -0.31
Vps35-201ENSMUST00000034131 Olfr1123A2AT85 323 aa13.08□□□□□ -0.32
Vps35-201ENSMUST00000034131 4930426L09RikE9Q0N7 123 aa13.08□□□□□ -0.32
Vps35-201ENSMUST00000034131 Cyp4a31F8WGU9 509 aa13.08□□□□□ -0.32
Vps35-201ENSMUST00000034131 Dmp1O55188 503 aa13.08□□□□□ -0.32
Vps35-201ENSMUST00000034131 PargO88622 969 aaKnown RBP13.08□□□□□ -0.32
Vps35-201ENSMUST00000034131 Zp3P10761 424 aa13.08□□□□□ -0.32
Vps35-201ENSMUST00000034131 PfklP12382 780 aa13.08□□□□□ -0.32
Vps35-201ENSMUST00000034131 Brcc3P46737 291 aa13.08□□□□□ -0.32
Vps35-201ENSMUST00000034131 CcnjQ3TZI6 379 aa13.08□□□□□ -0.32
Vps35-201ENSMUST00000034131 CenplQ3U3S3 329 aa13.08□□□□□ -0.32
Vps35-201ENSMUST00000034131 Coq8bQ566J8 533 aa13.08□□□□□ -0.32
Vps35-201ENSMUST00000034131 CrhbpQ60571 322 aa13.08□□□□□ -0.32
Vps35-201ENSMUST00000034131 Cd47Q61735 303 aa13.08□□□□□ -0.32
Vps35-201ENSMUST00000034131 CcncQ62447 283 aa13.08□□□□□ -0.32
Vps35-201ENSMUST00000034131 Sqstm1Q64337 442 aaKnown RBP13.08□□□□□ -0.32
Vps35-201ENSMUST00000034131 CbarpQ66L44 698 aa13.08□□□□□ -0.32
Vps35-201ENSMUST00000034131 MtdhQ80WJ7 579 aaKnown RBP13.08□□□□□ -0.32
Vps35-201ENSMUST00000034131 Utp15Q8C7V3 528 aaKnown RBP13.08□□□□□ -0.32
Vps35-201ENSMUST00000034131 Kdelr3Q8R1L4 214 aa13.08□□□□□ -0.32
Vps35-201ENSMUST00000034131 Gipc3Q8R5M0 297 aa13.08□□□□□ -0.32
Vps35-201ENSMUST00000034131 Vps4aQ8VEJ9 437 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms