RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Slc22a4Q9Z306 553 aa16.03■□□□□ 0.16
Shh-201ENSMUST00000002708 CroccQ8CJ40 2009 aa16.03■□□□□ 0.16
Shh-201ENSMUST00000002708 Pkd2l1A2A259 760 aa16.03■□□□□ 0.16
Shh-201ENSMUST00000002708 Fam43bA2AM80 330 aa16.03■□□□□ 0.16
Shh-201ENSMUST00000002708 Nipsnap3aB1AWZ3 247 aa16.03■□□□□ 0.16
Shh-201ENSMUST00000002708 Apol11bE9PUZ0 337 aa16.03■□□□□ 0.16
Shh-201ENSMUST00000002708 Fam181aJ3QNB7 292 aa16.03■□□□□ 0.16
Shh-201ENSMUST00000002708 RogdiQ3TDK6 287 aa16.03■□□□□ 0.16
Shh-201ENSMUST00000002708 Clec12aQ504P2 267 aa16.03■□□□□ 0.16
Shh-201ENSMUST00000002708 Sfmbt2Q5DTW2 938 aa16.03■□□□□ 0.16
Shh-201ENSMUST00000002708 Rbm11Q80YT9 238 aa16.03■□□□□ 0.16
Shh-201ENSMUST00000002708 Itln1bQ80ZA0 313 aa16.03■□□□□ 0.16
Shh-201ENSMUST00000002708 Coq4Q8BGB8 266 aa16.03■□□□□ 0.16
Shh-201ENSMUST00000002708 Cyp20a1Q8BKE6 462 aa16.03■□□□□ 0.16
Shh-201ENSMUST00000002708 PolbQ8K409 335 aa16.03■□□□□ 0.16
Shh-201ENSMUST00000002708 GaleQ8R059 347 aa16.03■□□□□ 0.16
Shh-201ENSMUST00000002708 Nudt4Q8R2U6 179 aa16.03■□□□□ 0.16
Shh-201ENSMUST00000002708 Lmcd1Q8VEE1 365 aa16.03■□□□□ 0.16
Shh-201ENSMUST00000002708 Snx5Q9D8U8 404 aa16.03■□□□□ 0.16
Shh-201ENSMUST00000002708 Kcne5Q9QZ26 143 aa16.03■□□□□ 0.16
Shh-201ENSMUST00000002708 Igkv17-121A0A0G2JFA8 117 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Olfr1215A3KGY3 312 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Catsperg2C6KI89 1145 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Gm2237E9Q501 211 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Gm3591K7N6X2 186 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 RbpjlO08674 515 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Cdk2ap1O35207 114 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Cd160O88875 185 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Akap3O88987 864 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Cyp21P03940 487 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 OstnP61364 130 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 ErgP81270 486 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Smim24Q0VG18 120 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Wbp4Q61048 376 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Vsx2Q61412 361 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Znf280cQ6P3Y5 742 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Snx31Q6P8Y7 439 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Hmgcs1Q8JZK9 520 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Vmn1r22Q8R2D1 302 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Vmn1r38Q8R2E1 302 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Olfr606Q8VGZ8 319 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Uts2rQ8VIH9 385 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Asb9Q91ZT8 290 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Lgals2Q9CQW5 130 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Ints11Q9CWS4 600 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Abcb8Q9CXJ4 717 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 2610042L04RikQ9D073 150 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Dcdc2cQ9D1B8 347 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Nif3l1Q9EQ80 376 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Hacl1Q9QXE0 581 aa16.02■□□□□ 0.16
Shh-201ENSMUST00000002708 Bmp6P20722 510 aa16.02■□□□□ 0.15
Shh-201ENSMUST00000002708 Gpr3P35413 330 aa16.02■□□□□ 0.15
Shh-201ENSMUST00000002708 Hk3Q3TRM8 922 aa16.02■□□□□ 0.15
Shh-201ENSMUST00000002708 Rnf215Q5SPX3 379 aa16.02■□□□□ 0.15
Shh-201ENSMUST00000002708 Rcn3Q8BH97 328 aa16.02■□□□□ 0.15
Shh-201ENSMUST00000002708 Q8CC96 669 aa16.02■□□□□ 0.15
Shh-201ENSMUST00000002708 Olfr1310Q8VF85 312 aa16.02■□□□□ 0.15
Shh-201ENSMUST00000002708 Olfr985Q8VGB4 311 aa16.02■□□□□ 0.15
Shh-201ENSMUST00000002708 Gorasp1Q91X51 446 aa16.02■□□□□ 0.15
Shh-201ENSMUST00000002708 Dpy30Q99LT0 99 aa16.02■□□□□ 0.15
Shh-201ENSMUST00000002708 Mfsd10Q9D2V8 456 aaKnown RBP16.02■□□□□ 0.15
Shh-201ENSMUST00000002708 Upk3bl1Q9D701 249 aa16.02■□□□□ 0.15
Shh-201ENSMUST00000002708 Rgs20Q9QZB1 239 aa16.02■□□□□ 0.15
Shh-201ENSMUST00000002708 Slc25a14Q9Z2B2 325 aa16.02■□□□□ 0.15
Shh-201ENSMUST00000002708 Obsl1D3YYU8 1804 aaKnown RBP16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Sirpb1aA0A0A6YYP6 397 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Btbd35f28A2CFD5 498 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 TagapB2RWW0 714 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Trim15G3UY57 292 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Btbd35f30J3QML3 498 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Gpr25P0C5I1 358 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 TshrP47750 764 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 NficP70255 439 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Pde7aP70453 456 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Parp8Q3UD82 852 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Ppm1nQ8BGL1 404 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 UstQ8BUB6 407 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Tmem221Q8K071 230 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 AjubaQ91XC0 547 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 EtfaQ99LC5 333 aaKnown RBP16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Slco1a4Q9EP96 670 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Dio2Q9Z1Y9 266 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Olfr1247A2AT78 314 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 FiglaO55208 194 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Tuba3aP05214 450 aaKnown RBP16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Znf703P0CL69 594 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Slc2a2P14246 523 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 MaxP28574 160 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 CenpcP49452 906 aaKnown RBP16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Tapt1Q4VBD2 564 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Angptl1Q640P2 490 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Znf366Q6NS86 746 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Paqr3Q6TCG8 311 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Ranbp10Q6VN19 620 aaKnown RBP16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Zfyve1Q810J8 777 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Cers6Q8C172 384 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Ftsj1Q8CBC7 324 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Unc5aQ8K1S4 898 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Mlf2Q99KX1 247 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Ccdc77Q9CZH8 489 aa16.01■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms