RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 DIO3P55073 304 aa17.05■□□□□ 0.32
PHGDH-232ENST00000641947 SQLEQ14534 574 aa17.05■□□□□ 0.32
PHGDH-232ENST00000641947 ALG11Q2TAA5 492 aa17.05■□□□□ 0.32
PHGDH-232ENST00000641947 OGFOD2Q6N063 350 aa17.05■□□□□ 0.32
PHGDH-232ENST00000641947 SUSD1Q6UWL2 747 aa17.05■□□□□ 0.32
PHGDH-232ENST00000641947 GK5Q6ZS86 529 aa17.05■□□□□ 0.32
PHGDH-232ENST00000641947 RD3Q7Z3Z2 195 aa17.05■□□□□ 0.32
PHGDH-232ENST00000641947 SNX32Q86XE0 403 aa17.05■□□□□ 0.32
PHGDH-232ENST00000641947 C2orf73Q8N5S3 287 aaPredicted RBP17.05■□□□□ 0.32
PHGDH-232ENST00000641947 C12orf66Q96MD2 445 aa17.05■□□□□ 0.32
PHGDH-232ENST00000641947 BTBD10Q9BSF8 475 aa17.05■□□□□ 0.32
PHGDH-232ENST00000641947 CADM1Q9BY67 442 aaKnown RBP17.05■□□□□ 0.32
PHGDH-232ENST00000641947 IFRD1O00458 451 aaPredicted RBP17.04■□□□□ 0.32
PHGDH-232ENST00000641947 STK25O00506 426 aa17.04■□□□□ 0.32
PHGDH-232ENST00000641947 SLC22A2O15244 555 aa17.04■□□□□ 0.32
PHGDH-232ENST00000641947 HNRNPCL1O60812 293 aaKnown RBP17.04■□□□□ 0.32
PHGDH-232ENST00000641947 ZNF217O75362 1048 aa17.04■□□□□ 0.32
PHGDH-232ENST00000641947 PRDX6P30041 224 aa17.04■□□□□ 0.32
PHGDH-232ENST00000641947 HALP42357 657 aa17.04■□□□□ 0.32
PHGDH-232ENST00000641947 YPEL5P62699 121 aa17.04■□□□□ 0.32
PHGDH-232ENST00000641947 CTBSQ01459 385 aa17.04■□□□□ 0.32
PHGDH-232ENST00000641947 HMGCS1Q01581 520 aa17.04■□□□□ 0.32
PHGDH-232ENST00000641947 SGO1Q5FBB7 561 aa17.04■□□□□ 0.32
PHGDH-232ENST00000641947 C6orf136Q5SQH8 315 aa17.04■□□□□ 0.32
PHGDH-232ENST00000641947 RNF165Q6ZSG1 346 aa17.04■□□□□ 0.32
PHGDH-232ENST00000641947 RNF175Q8N4F7 328 aa17.04■□□□□ 0.32
PHGDH-232ENST00000641947 DEFB119Q8N690 84 aa17.04■□□□□ 0.32
PHGDH-232ENST00000641947 NEIL2Q969S2 332 aa17.04■□□□□ 0.32
PHGDH-232ENST00000641947 RAD51AP1Q96B01 352 aa17.04■□□□□ 0.32
PHGDH-232ENST00000641947 MTFMTQ96DP5 389 aaKnown RBP17.04■□□□□ 0.32
PHGDH-232ENST00000641947 C1orf50Q9BV19 199 aa17.04■□□□□ 0.32
PHGDH-232ENST00000641947 TMEM168Q9H0V1 697 aa17.04■□□□□ 0.32
PHGDH-232ENST00000641947 GPR27Q9NS67 375 aa17.04■□□□□ 0.32
PHGDH-232ENST00000641947 ZNF490Q9ULM2 529 aaPredicted RBP17.04■□□□□ 0.32
PHGDH-232ENST00000641947 A0A1W2PPC4 97 aa17.03■□□□□ 0.32
PHGDH-232ENST00000641947 VPS4BO75351 444 aa17.03■□□□□ 0.32
PHGDH-232ENST00000641947 PDYNP01213 254 aa17.03■□□□□ 0.32
PHGDH-232ENST00000641947 NPPBP16860 134 aa17.03■□□□□ 0.32
PHGDH-232ENST00000641947 GPX3P22352 226 aa17.03■□□□□ 0.32
PHGDH-232ENST00000641947 KELP23276 732 aa17.03■□□□□ 0.32
PHGDH-232ENST00000641947 ADSLP30566 484 aaPredicted RBP17.03■□□□□ 0.32
PHGDH-232ENST00000641947 NEK2P51955 445 aa17.03■□□□□ 0.32
PHGDH-232ENST00000641947 THOP1P52888 689 aa17.03■□□□□ 0.32
PHGDH-232ENST00000641947 NME5P56597 212 aa17.03■□□□□ 0.32
PHGDH-232ENST00000641947 YBX1P67809 324 aaKnown RBP17.03■□□□□ 0.32
PHGDH-232ENST00000641947 DOC2AQ14183 400 aa17.03■□□□□ 0.32
PHGDH-232ENST00000641947 ZRSR2Q15696 482 aaKnown RBP17.03■□□□□ 0.32
PHGDH-232ENST00000641947 PAOXQ6QHF9 649 aa17.03■□□□□ 0.32
PHGDH-232ENST00000641947 FUNDC1Q8IVP5 155 aa17.03■□□□□ 0.32
PHGDH-232ENST00000641947 CHCHD4Q8N4Q1 142 aa17.03■□□□□ 0.32
PHGDH-232ENST00000641947 SNX19Q92543 992 aa17.03■□□□□ 0.32
PHGDH-232ENST00000641947 CMTM5Q96DZ9 223 aa17.03■□□□□ 0.32
PHGDH-232ENST00000641947 SLC6A18Q96N87 628 aa17.03■□□□□ 0.32
PHGDH-232ENST00000641947 TRIT1Q9H3H1 467 aaKnown RBP17.03■□□□□ 0.32
PHGDH-232ENST00000641947 IMP3Q9NV31 184 aaKnown RBP17.03■□□□□ 0.32
PHGDH-232ENST00000641947 TBC1D29Q9UFV1 150 aa17.03■□□□□ 0.32
PHGDH-232ENST00000641947 CFAP73A6NFT4 308 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 KCNJ13O60928 360 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 ULK1O75385 1050 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 IDSP22304 550 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 VARSP26640 1264 aaKnown RBP17.02■□□□□ 0.32
PHGDH-232ENST00000641947 HTR1BP28222 390 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 RPS9P46781 194 aaKnown RBP17.02■□□□□ 0.32
PHGDH-232ENST00000641947 RASSF2P50749 326 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 ATP4BP51164 291 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 SRP54P61011 504 aaKnown RBP17.02■□□□□ 0.32
PHGDH-232ENST00000641947 IRF8Q02556 426 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 PCDH1Q08174 1060 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 TSTA3Q13630 321 aaPredicted RBP17.02■□□□□ 0.32
PHGDH-232ENST00000641947 E2F2Q14209 437 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 UAP1L1Q3KQV9 507 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 XKR6Q5GH73 641 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 ADNP2Q6IQ32 1131 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 CAPN13Q6MZZ7 669 aaPredicted RBP17.02■□□□□ 0.32
PHGDH-232ENST00000641947 TRIM46Q7Z4K8 759 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 TBC1D21Q8IYX1 336 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 MAGEC3Q8TD91 643 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 CCT7Q99832 543 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 ACPTQ9BZG2 426 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 TCEAL2Q9H3H9 227 aaPredicted RBP17.02■□□□□ 0.32
PHGDH-232ENST00000641947 RIC8BQ9NVN3 520 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 KLF15Q9UIH9 416 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 DMTF1Q9Y222 760 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 GPR45Q9Y5Y3 372 aa17.02■□□□□ 0.32
PHGDH-232ENST00000641947 PDZK1P1A8MUH7 402 aa17.02■□□□□ 0.31
PHGDH-232ENST00000641947 K7ESF4 209 aa17.02■□□□□ 0.31
PHGDH-232ENST00000641947 PSMD12O00232 456 aaPredicted RBP17.02■□□□□ 0.31
PHGDH-232ENST00000641947 TNFRSF10CO14798 259 aa17.02■□□□□ 0.31
PHGDH-232ENST00000641947 PDGFBP01127 241 aaPredicted RBP17.02■□□□□ 0.31
PHGDH-232ENST00000641947 JUPP14923 745 aa17.02■□□□□ 0.31
PHGDH-232ENST00000641947 RABIFP47224 123 aa17.02■□□□□ 0.31
PHGDH-232ENST00000641947 ERVK-8P63133 956 aa17.02■□□□□ 0.31
PHGDH-232ENST00000641947 SLC25A3Q00325 362 aa17.02■□□□□ 0.31
PHGDH-232ENST00000641947 HERC3Q15034 1050 aa17.02■□□□□ 0.31
PHGDH-232ENST00000641947 NR6A1Q15406 480 aa17.02■□□□□ 0.31
PHGDH-232ENST00000641947 CATSPEREQ5SY80 951 aa17.02■□□□□ 0.31
PHGDH-232ENST00000641947 SLCO4C1Q6ZQN7 724 aa17.02■□□□□ 0.31
PHGDH-232ENST00000641947 LONP2Q86WA8 852 aa17.02■□□□□ 0.31
PHGDH-232ENST00000641947 NRROSQ86YC3 692 aa17.02■□□□□ 0.31
PHGDH-232ENST00000641947 RGL4Q8IZJ4 473 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms