RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 DHX58Q96C10 678 aa4.01□□□□□ -1.77
CCDC7-216ENST00000640058 C10orf90Q96M02 699 aa4.01□□□□□ -1.77
CCDC7-216ENST00000640058 SOSTQ9BQB4 213 aa4.01□□□□□ -1.77
CCDC7-216ENST00000640058 WWTR1Q9GZV5 400 aa4.01□□□□□ -1.77
CCDC7-216ENST00000640058 THAP2Q9H0W7 228 aa4.01□□□□□ -1.77
CCDC7-216ENST00000640058 OPA3Q9H6K4 179 aa4.01□□□□□ -1.77
CCDC7-216ENST00000640058 DPP3Q9NY33 737 aa4.01□□□□□ -1.77
CCDC7-216ENST00000640058 ADD3Q9UEY8 706 aaKnown RBP4.01□□□□□ -1.77
CCDC7-216ENST00000640058 TMED3Q9Y3Q3 217 aa4.01□□□□□ -1.77
CCDC7-216ENST00000640058 PCNX3Q9H6A9 2034 aa4□□□□□ -1.77
CCDC7-216ENST00000640058 GPR75-ASB3A0A0A6YYF3 556 aa4□□□□□ -1.77
CCDC7-216ENST00000640058 TMEM221A6NGB7 291 aa4□□□□□ -1.77
CCDC7-216ENST00000640058 GSCP56915 257 aaPredicted RBP4□□□□□ -1.77
CCDC7-216ENST00000640058 ELAVL2Q12926 359 aaKnown RBP4□□□□□ -1.77
CCDC7-216ENST00000640058 CALCOCO2Q13137 446 aa4□□□□□ -1.77
CCDC7-216ENST00000640058 FASTKD3Q14CZ7 662 aaKnown RBP4□□□□□ -1.77
CCDC7-216ENST00000640058 TNIP1Q15025 636 aa4□□□□□ -1.77
CCDC7-216ENST00000640058 CA9Q16790 459 aa4□□□□□ -1.77
CCDC7-216ENST00000640058 SYT14P1Q58G82 188 aa4□□□□□ -1.77
CCDC7-216ENST00000640058 LCN1P1Q5VSP4 162 aa4□□□□□ -1.77
CCDC7-216ENST00000640058 ZNF595Q8IYB9 648 aa4□□□□□ -1.77
CCDC7-216ENST00000640058 Q8NBF4 154 aa4□□□□□ -1.77
CCDC7-216ENST00000640058 OR1L3Q8NH93 324 aa4□□□□□ -1.77
CCDC7-216ENST00000640058 EXD1Q8NHP7 514 aa4□□□□□ -1.77
CCDC7-216ENST00000640058 SYN2Q92777 582 aaPredicted RBP4□□□□□ -1.77
CCDC7-216ENST00000640058 SPDL1Q96EA4 605 aa4□□□□□ -1.77
CCDC7-216ENST00000640058 THOC1Q96FV9 657 aaKnown RBP4□□□□□ -1.77
CCDC7-216ENST00000640058 NAP1L4Q99733 375 aaKnown RBP4□□□□□ -1.77
CCDC7-216ENST00000640058 SDF4Q9BRK5 362 aa4□□□□□ -1.77
CCDC7-216ENST00000640058 MAF1Q9H063 256 aa4□□□□□ -1.77
CCDC7-216ENST00000640058 GHITMQ9H3K2 345 aa4□□□□□ -1.77
CCDC7-216ENST00000640058 TBC1D29Q9UFV1 150 aa4□□□□□ -1.77
CCDC7-216ENST00000640058 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4□□□□□ -1.77
CCDC7-216ENST00000640058 WBP11Q9Y2W2 641 aaKnown RBP4□□□□□ -1.77
CCDC7-216ENST00000640058 NME7Q9Y5B8 376 aa4□□□□□ -1.77
CCDC7-216ENST00000640058 C2orf81A6NN90 581 aa3.99□□□□□ -1.77
CCDC7-216ENST00000640058 SRSF10O75494 262 aaKnown RBP3.99□□□□□ -1.77
CCDC7-216ENST00000640058 TOMM70O94826 608 aa3.99□□□□□ -1.77
CCDC7-216ENST00000640058 SLC2A2P11168 524 aaPredicted RBP3.99□□□□□ -1.77
CCDC7-216ENST00000640058 RBMS1P29558 406 aaKnown RBP3.99□□□□□ -1.77
CCDC7-216ENST00000640058 CSTF2P33240 577 aaKnown RBP eCLIP3.99□□□□□ -1.77
CCDC7-216ENST00000640058 CCR10P46092 362 aa3.99□□□□□ -1.77
CCDC7-216ENST00000640058 STAT2P52630 851 aa3.99□□□□□ -1.77
CCDC7-216ENST00000640058 PCLAFQ15004 111 aa3.99□□□□□ -1.77
CCDC7-216ENST00000640058 C4orf50Q6ZRC1 276 aa3.99□□□□□ -1.77
CCDC7-216ENST00000640058 Q8N377 158 aa3.99□□□□□ -1.77
CCDC7-216ENST00000640058 GUF1Q8N442 669 aaKnown RBP3.99□□□□□ -1.77
CCDC7-216ENST00000640058 AQP11Q8NBQ7 271 aa3.99□□□□□ -1.77
CCDC7-216ENST00000640058 OR2L2Q8NH16 312 aa3.99□□□□□ -1.77
CCDC7-216ENST00000640058 MAPK15Q8TD08 544 aa3.99□□□□□ -1.77
CCDC7-216ENST00000640058 GTF3AQ92664 365 aaKnown RBP3.99□□□□□ -1.77
CCDC7-216ENST00000640058 SKA1Q96BD8 255 aa3.99□□□□□ -1.77
CCDC7-216ENST00000640058 CALML4Q96GE6 196 aa3.99□□□□□ -1.77
CCDC7-216ENST00000640058 FAM20AQ96MK3 541 aa3.99□□□□□ -1.77
CCDC7-216ENST00000640058 PRICKLE1Q96MT3 831 aaPredicted RBP3.99□□□□□ -1.77
CCDC7-216ENST00000640058 UBA5Q9GZZ9 404 aa3.99□□□□□ -1.77
CCDC7-216ENST00000640058 EQTNQ9NQ60 294 aa3.99□□□□□ -1.77
CCDC7-216ENST00000640058 SLC35C2Q9NQQ7 365 aa3.99□□□□□ -1.77
CCDC7-216ENST00000640058 TEX10Q9NXF1 929 aaPredicted RBP3.99□□□□□ -1.77
CCDC7-216ENST00000640058 MUTYHQ9UIF7 546 aa3.99□□□□□ -1.77
CCDC7-216ENST00000640058 ITIH6Q6UXX5 1313 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 A8MV72 311 aaPredicted RBP3.98□□□□□ -1.77
CCDC7-216ENST00000640058 EPM2AB3EWF7 344 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 FPGTO14772 594 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 GLRA3O75311 464 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 CDK2AP2O75956 126 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 HAPLN1P10915 354 aaPredicted RBP3.98□□□□□ -1.77
CCDC7-216ENST00000640058 HOXD13P35453 343 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 RXRGP48443 463 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 CHAF1BQ13112 559 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 MOGAT2Q3SYC2 334 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 LYSMD4Q5XG99 296 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 FAM205BPQ63HN1 556 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 C11orf63Q6NUN7 778 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 APPL2Q8NEU8 664 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 PRSS33Q8NF86 280 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 ATP8B4Q8TF62 1192 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 PIGBQ92521 554 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 SFXN2Q96NB2 322 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 FOXN4Q96NZ1 517 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 RAB11FIP5Q9BXF6 653 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 BLOC1S4Q9NUP1 217 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 VPS28Q9UK41 221 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 PADI2Q9Y2J8 665 aa3.98□□□□□ -1.77
CCDC7-216ENST00000640058 IGHV3OR16-10A0A075B7F0 116 aa3.97□□□□□ -1.77
CCDC7-216ENST00000640058 hCG_1807616A0A1W2PRN6 198 aa3.97□□□□□ -1.77
CCDC7-216ENST00000640058 ENTPD3O75355 529 aa3.97□□□□□ -1.77
CCDC7-216ENST00000640058 TRUB2O95900 331 aaKnown RBP3.97□□□□□ -1.77
CCDC7-216ENST00000640058 IGHEP01854 428 aa3.97□□□□□ -1.77
CCDC7-216ENST00000640058 CSH1P0DML2 217 aa3.97□□□□□ -1.77
CCDC7-216ENST00000640058 CSH2P0DML3 217 aa3.97□□□□□ -1.77
CCDC7-216ENST00000640058 AZU1P20160 251 aa3.97□□□□□ -1.77
CCDC7-216ENST00000640058 SAT1P21673 171 aa3.97□□□□□ -1.77
CCDC7-216ENST00000640058 CYCSP99999 105 aaKnown RBP3.97□□□□□ -1.77
CCDC7-216ENST00000640058 MAT1AQ00266 395 aaKnown RBP3.97□□□□□ -1.77
CCDC7-216ENST00000640058 GUCY2DQ02846 1103 aa3.97□□□□□ -1.77
CCDC7-216ENST00000640058 MTF1Q14872 753 aa3.97□□□□□ -1.77
CCDC7-216ENST00000640058 UGT3A2Q3SY77 523 aa3.97□□□□□ -1.77
CCDC7-216ENST00000640058 SLC35D3Q5M8T2 416 aa3.97□□□□□ -1.77
CCDC7-216ENST00000640058 G2E3Q7L622 706 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms