RNA–Protein interactions for RNA: ENST00000638605.1

ALK-206, Transcript of ALK receptor tyrosine kinase, humanhuman

TSL 1 (best)

Gene ALK, Length 1,757 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-206ENST00000638605 RPE65Q16518 533 aa12.11□□□□□ -0.47
ALK-206ENST00000638605 CPSF6Q16630 551 aaKnown RBP eCLIP12.11□□□□□ -0.47
ALK-206ENST00000638605 SPRED3Q2MJR0 410 aa12.11□□□□□ -0.47
ALK-206ENST00000638605 SGO1Q5FBB7 561 aa12.11□□□□□ -0.47
ALK-206ENST00000638605 XKR6Q5GH73 641 aa12.11□□□□□ -0.47
ALK-206ENST00000638605 TJAP1Q5JTD0 557 aa12.11□□□□□ -0.47
ALK-206ENST00000638605 CAPN13Q6MZZ7 669 aaPredicted RBP12.11□□□□□ -0.47
ALK-206ENST00000638605 IL27RAQ6UWB1 636 aa12.11□□□□□ -0.47
ALK-206ENST00000638605 EFL1Q7Z2Z2 1120 aaKnown RBP12.11□□□□□ -0.47
ALK-206ENST00000638605 PHACTR4Q8IZ21 702 aa12.11□□□□□ -0.47
ALK-206ENST00000638605 GBP7Q8N8V2 638 aaPredicted RBP12.11□□□□□ -0.47
ALK-206ENST00000638605 TUBGCP3Q96CW5 907 aa12.11□□□□□ -0.47
ALK-206ENST00000638605 CATSPER2Q96P56 530 aa12.11□□□□□ -0.47
ALK-206ENST00000638605 OR4K3Q96R72 315 aa12.11□□□□□ -0.47
ALK-206ENST00000638605 NTMT1Q9BV86 223 aa12.11□□□□□ -0.47
ALK-206ENST00000638605 NUSAP1Q9BXS6 441 aaKnown RBP12.11□□□□□ -0.47
ALK-206ENST00000638605 TM9SF3Q9HD45 589 aa12.11□□□□□ -0.47
ALK-206ENST00000638605 PRM3Q9NNZ6 103 aa12.11□□□□□ -0.47
ALK-206ENST00000638605 CCDC177Q9NQR7 707 aaPredicted RBP12.11□□□□□ -0.47
ALK-206ENST00000638605 GPR27Q9NS67 375 aa12.11□□□□□ -0.47
ALK-206ENST00000638605 TRNAU1APQ9NX07 287 aaKnown RBP12.11□□□□□ -0.47
ALK-206ENST00000638605 GIMAP2Q9UG22 337 aa12.11□□□□□ -0.47
ALK-206ENST00000638605 TDRD6O60522 2096 aaKnown RBP12.11□□□□□ -0.47
ALK-206ENST00000638605 TMEM221A6NGB7 291 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 E7ENX8 843 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 M0R296 226 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 CELA2BP08218 269 aaPredicted RBP12.1□□□□□ -0.47
ALK-206ENST00000638605 MTHFD1P11586 935 aaKnown RBP12.1□□□□□ -0.47
ALK-206ENST00000638605 IRF8Q02556 426 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 TAP2Q03519 686 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 CHIT1Q13231 466 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 SRSF5Q13243 272 aaKnown RBP12.1□□□□□ -0.47
ALK-206ENST00000638605 C1orf61Q13536 156 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 MAMSTRQ6ZN01 415 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 NRROSQ86YC3 692 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 MFSD2AQ8NA29 543 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 CEP70Q8NHQ1 597 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 FAM174AQ8TBP5 190 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 MAELQ96JY0 434 aaKnown RBP12.1□□□□□ -0.47
ALK-206ENST00000638605 FAM210AQ96ND0 272 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 CAMK1GQ96NX5 476 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 CCDC28BQ9BUN5 200 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 ACAT2Q9BWD1 397 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 XKR8Q9H6D3 395 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 SAR1AQ9NR31 198 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 APOBEC3BQ9UH17 382 aaKnown RBP12.1□□□□□ -0.47
ALK-206ENST00000638605 TRPS1Q9UHF7 1281 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 POLG2Q9UHN1 485 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 SPAG17Q6Q759 2223 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 VPS13AQ96RL7 3174 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 A0A1W2PR77 199 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 TLR4O00206 839 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 CBX6O95503 412 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 JUNDP17535 347 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 CSTF1Q05048 431 aaKnown RBP12.1□□□□□ -0.47
ALK-206ENST00000638605 PRRT3Q5FWE3 981 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 SWT1Q5T5J6 900 aaKnown RBP12.1□□□□□ -0.47
ALK-206ENST00000638605 YTHDF3Q7Z739 585 aaKnown RBP12.1□□□□□ -0.47
ALK-206ENST00000638605 TAF8Q7Z7C8 310 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 TMPRSS11BQ86T26 416 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 RAB42Q8N4Z0 105 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 ACTRT2Q8TDY3 377 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 JPH3Q8WXH2 748 aaPredicted RBP12.1□□□□□ -0.47
ALK-206ENST00000638605 SH3KBP1Q96B97 665 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 MTFMTQ96DP5 389 aaKnown RBP12.1□□□□□ -0.47
ALK-206ENST00000638605 GSDMCQ9BYG8 508 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 MVB12BQ9H7P6 319 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 AKTIPQ9H8T0 292 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 PFDN4Q9NQP4 134 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 PRMT8Q9NR22 394 aaPredicted RBP12.1□□□□□ -0.47
ALK-206ENST00000638605 FARSBQ9NSD9 589 aaKnown RBP12.1□□□□□ -0.47
ALK-206ENST00000638605 DYRK1BQ9Y463 629 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 HEBP2Q9Y5Z4 205 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 KCNE2Q9Y6J6 123 aa12.1□□□□□ -0.47
ALK-206ENST00000638605 THADAQ6YHU6 1953 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 WDFY4Q6ZS81 3184 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 PRR5-ARHGAP8B1AHC4 643 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 PRAMEF4O60810 478 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 PEX11AO75192 247 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 GNAZP19086 355 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 BLKP51451 505 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 ABRAXAS2Q15018 415 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 GALNTL6Q49A17 601 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 WDR45BQ5MNZ6 344 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 PRAMEF14Q5SWL7 426 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 PRAMEF9Q5VWM5 478 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 PRAMEF13Q5VWM6 474 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 METTL21CQ5VZV1 264 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 ABRAXAS1Q6UWZ7 409 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 LPCAT2Q7L5N7 544 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 DCP2Q8IU60 420 aaKnown RBP12.09□□□□□ -0.47
ALK-206ENST00000638605 C1orf210Q8IVY1 113 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 KLHDC8AQ8IYD2 350 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 LRRC56Q8IYG6 542 aaPredicted RBP12.09□□□□□ -0.47
ALK-206ENST00000638605 OR52E1Q8NGJ3 308 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 NEIL2Q969S2 332 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 CXorf40BQ96DE9 158 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 ATXN2Q99700 1313 aaKnown RBP12.09□□□□□ -0.47
ALK-206ENST00000638605 SGPP1Q9BX95 441 aa12.09□□□□□ -0.47
ALK-206ENST00000638605 DUSP15Q9H1R2 295 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms