RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 KLHL38Q2WGJ6 581 aa17.04■□□□□ 0.32
PNKP-230ENST00000638016 LACTB2Q53H82 288 aaPredicted RBP17.04■□□□□ 0.32
PNKP-230ENST00000638016 ATG14Q6ZNE5 492 aa17.04■□□□□ 0.32
PNKP-230ENST00000638016 PPIL6Q8IXY8 311 aa17.04■□□□□ 0.32
PNKP-230ENST00000638016 RAD51AP1Q96B01 352 aa17.04■□□□□ 0.32
PNKP-230ENST00000638016 GBP5Q96PP8 586 aa17.04■□□□□ 0.32
PNKP-230ENST00000638016 TCF12Q99081 682 aa17.04■□□□□ 0.32
PNKP-230ENST00000638016 MIPEPQ99797 713 aa17.04■□□□□ 0.32
PNKP-230ENST00000638016 NLNQ9BYT8 704 aa17.04■□□□□ 0.32
PNKP-230ENST00000638016 EPN3Q9H201 632 aa17.04■□□□□ 0.32
PNKP-230ENST00000638016 C20orf96Q9NUD7 363 aaPredicted RBP17.04■□□□□ 0.32
PNKP-230ENST00000638016 EURLQ9NYK6 297 aa17.04■□□□□ 0.32
PNKP-230ENST00000638016 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.04■□□□□ 0.32
PNKP-230ENST00000638016 ASIC3Q9UHC3 531 aa17.04■□□□□ 0.32
PNKP-230ENST00000638016 ANKRD12Q6UB98 2062 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 PCM1Q15154 2024 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 E5RI56 91 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 CES2O00748 559 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 DNALI1O14645 258 aaPredicted RBP17.03■□□□□ 0.32
PNKP-230ENST00000638016 KPNA5O15131 536 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 KDM1AO60341 852 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 CTSVO60911 334 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 RFPL1O75677 317 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 USP1O94782 785 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 MATN4O95460 622 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 RAB40ALP0C0E4 278 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 ITGAXP20702 1163 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 ADARP55265 1226 aaKnown RBP17.03■□□□□ 0.32
PNKP-230ENST00000638016 TLE1Q04724 770 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 DHX9Q08211 1270 aaKnown RBP17.03■□□□□ 0.32
PNKP-230ENST00000638016 PTK6Q13882 451 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 LONRF1Q17RB8 773 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 FIGLAQ6QHK4 219 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 IGDCC3Q8IVU1 814 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 KLHL7Q8IXQ5 586 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 GRK7Q8WTQ7 553 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 PDLIM2Q96JY6 352 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 ACAT2Q9BWD1 397 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 CHRNA10Q9GZZ6 450 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 INTS10Q9NVR2 710 aaKnown RBP17.03■□□□□ 0.32
PNKP-230ENST00000638016 PLCL2Q9UPR0 1127 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 MYO18BQ8IUG5 2567 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 HEATR5BQ9P2D3 2071 aa17.03■□□□□ 0.32
PNKP-230ENST00000638016 H3BMM5 538 aa17.02■□□□□ 0.32
PNKP-230ENST00000638016 MASP2O00187 686 aa17.02■□□□□ 0.32
PNKP-230ENST00000638016 HAUS5O94927 633 aa17.02■□□□□ 0.32
PNKP-230ENST00000638016 RECKO95980 971 aa17.02■□□□□ 0.32
PNKP-230ENST00000638016 GCGRP47871 477 aa17.02■□□□□ 0.32
PNKP-230ENST00000638016 GNG11P61952 73 aa17.02■□□□□ 0.32
PNKP-230ENST00000638016 HSP90AA5PQ58FG0 334 aa17.02■□□□□ 0.32
PNKP-230ENST00000638016 HP1BP3Q5SSJ5 553 aaPredicted RBP17.02■□□□□ 0.32
PNKP-230ENST00000638016 MLIPQ5VWP3 458 aa17.02■□□□□ 0.32
PNKP-230ENST00000638016 RHBDD2Q6NTF9 364 aa17.02■□□□□ 0.32
PNKP-230ENST00000638016 SUSD1Q6UWL2 747 aa17.02■□□□□ 0.32
PNKP-230ENST00000638016 MCATQ8IVS2 390 aaKnown RBP17.02■□□□□ 0.32
PNKP-230ENST00000638016 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.02■□□□□ 0.32
PNKP-230ENST00000638016 NDNQ99608 321 aa17.02■□□□□ 0.32
PNKP-230ENST00000638016 WDR83Q9BRX9 315 aaKnown RBP17.02■□□□□ 0.32
PNKP-230ENST00000638016 TRIM51Q9BSJ1 452 aa17.02■□□□□ 0.32
PNKP-230ENST00000638016 SYNPO2LQ9H987 977 aa17.02■□□□□ 0.32
PNKP-230ENST00000638016 PLAC1Q9HBJ0 212 aa17.02■□□□□ 0.32
PNKP-230ENST00000638016 SLC22A11Q9NSA0 550 aa17.02■□□□□ 0.32
PNKP-230ENST00000638016 IARS2Q9NSE4 1012 aaKnown RBP17.02■□□□□ 0.32
PNKP-230ENST00000638016 MAGEB16A2A368 324 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 MKRN2OSH3BPM6 223 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 KLF7O75840 302 aaPredicted RBP17.01■□□□□ 0.31
PNKP-230ENST00000638016 MED26O95402 600 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 ERVK-10P10266 1014 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 TCP1P17987 556 aaKnown RBP17.01■□□□□ 0.31
PNKP-230ENST00000638016 IVDP26440 423 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 CCL11P51671 97 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 PGGT1BP53609 377 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 ATP1A4Q13733 1029 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 CRYMQ14894 314 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 TTC23LQ6PF05 361 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 CREG2Q8IUH2 290 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 APLFQ8IW19 511 aaPredicted RBP17.01■□□□□ 0.31
PNKP-230ENST00000638016 METTL27Q8N6F8 245 aaPredicted RBP17.01■□□□□ 0.31
PNKP-230ENST00000638016 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.01■□□□□ 0.31
PNKP-230ENST00000638016 PPFIBP2Q8ND30 876 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 OR2L3Q8NG85 312 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 OR2A1Q8NGT9 310 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 CD200R1Q8TD46 325 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 THAP4Q8WY91 577 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 FOPNLQ96NB1 174 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 PKP4Q99569 1192 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 GPR21Q99679 349 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 RAB11FIP5Q9BXF6 653 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 ING2Q9H160 280 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 SLC6A20Q9NP91 592 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 STOX2Q9P2F5 926 aaPredicted RBP17.01■□□□□ 0.31
PNKP-230ENST00000638016 FBXO5Q9UKT4 447 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 AP1M2Q9Y6Q5 423 aa17.01■□□□□ 0.31
PNKP-230ENST00000638016 MDC1Q14676 2089 aaKnown RBP17■□□□□ 0.31
PNKP-230ENST00000638016 A0A0J9YVX5 310 aa17■□□□□ 0.31
PNKP-230ENST00000638016 C9J4A7 227 aa17■□□□□ 0.31
PNKP-230ENST00000638016 PFDN6O15212 129 aa17■□□□□ 0.31
PNKP-230ENST00000638016 PSIP1O75475 530 aaKnown RBP17■□□□□ 0.31
PNKP-230ENST00000638016 WISP1O95388 367 aa17■□□□□ 0.31
PNKP-230ENST00000638016 HBQ1P09105 142 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms