RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 SOX6P35712 828 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 PAF1Q8N7H5 531 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 ATG16L2Q8NAA4 619 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 GRPEL2Q8TAA5 225 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 TMCO6Q96DC7 493 aa15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 PARK7Q99497 189 aaKnown RBP15.2■□□□□ 0.02
CACNA1A-235ENST00000637004 CA12O43570 354 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 PCDHGA12O60330 932 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 ZNF682O95780 498 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 CNPP09543 421 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 HOXA9P31269 272 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 PBX3P40426 434 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 MAGEA11P43364 429 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 RPP38P78345 283 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 GALNT3Q14435 633 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 MFSD10Q14728 455 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 PCBP2Q15366 365 aaKnown RBP eCLIP15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 HORMAD1Q86X24 394 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 PLPP6Q8IY26 295 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 NLGN4XQ8N0W4 816 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 PGBD5Q8N414 524 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 SETD6Q8TBK2 473 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 ZFP42Q96MM3 310 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 CPPED1Q9BRF8 314 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 TMEM246Q9BRR3 403 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 ZYG11BQ9C0D3 744 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 CLMPQ9H6B4 373 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 NLE1Q9NVX2 485 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 ABCG2Q9UNQ0 655 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 COL4A4P53420 1690 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 LOC100506127A0A0U1RQW1 187 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 SMIM35A0A1B0GVV1 85 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 FAM25AB3EWG3 89 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 FAM25CB3EWG5 89 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 FAM25GB3EWG6 89 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 PIRTP0C851 137 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 PKMP14618 531 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 GZMMP51124 257 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 UGT2B15P54855 530 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 CREMQ03060 361 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 ABHD18Q0P651 414 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 GTDC1Q4AE62 458 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 PRSS36Q5K4E3 855 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 ZCCHC8Q6NZY4 707 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 GOLGA7Q7Z5G4 137 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 TMEM132CQ8N3T6 1108 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 CARNMT1Q8N4J0 409 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 OR10Q1Q8NGQ4 319 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 SCAMP5Q8TAC9 235 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 EEF1AKMT1Q8WVE0 214 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 SLA2Q9H6Q3 261 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 QPCTLQ9NXS2 382 aa15.19■□□□□ 0.02
CACNA1A-235ENST00000637004 GOLGA8CPA6NN73 597 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 WNT9AO14904 365 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 CAPN5O15484 640 aaPredicted RBP15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 CD9P21926 228 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 ADCYAP1R1P41586 468 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 NPRL3Q12980 569 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 GTF2H2Q13888 395 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 GTF2H2CQ6P1K8 395 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 UTS2BQ765I0 119 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 MILR1Q7Z6M3 343 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 SIDT2Q8NBJ9 832 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 LSM14AQ8ND56 463 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 DNASE1L2Q92874 299 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 MED30Q96HR3 178 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 CEP19Q96LK0 163 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 TMEM248Q9NWD8 314 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 WBP1LQ9NX94 342 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 CACNG4Q9UBN1 327 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 SAMHD1Q9Y3Z3 626 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 CCL27Q9Y4X3 112 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 SLC28A1O00337 649 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 OR7A17O14581 309 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 EPHA2P29317 976 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 LBX1P52954 281 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 IL10RBQ08334 325 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 CCDC71Q8IV32 467 aaPredicted RBP15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 LIX1Q8N485 282 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 ZNF296Q8WUU4 475 aaPredicted RBP15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 TMEM40Q8WWA1 233 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 SERPINB11Q96P15 392 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 TAS2R9Q9NYW1 312 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 PSORS1C1Q9UIG5 152 aa15.18■□□□□ 0.02
CACNA1A-235ENST00000637004 A0A096LPI6 279 aa15.17■□□□□ 0.02
CACNA1A-235ENST00000637004 KRT6AP02538 564 aa15.17■□□□□ 0.02
CACNA1A-235ENST00000637004 KRT6BP04259 564 aa15.17■□□□□ 0.02
CACNA1A-235ENST00000637004 FABP3P05413 133 aa15.17■□□□□ 0.02
CACNA1A-235ENST00000637004 ITGB6P18564 788 aa15.17■□□□□ 0.02
CACNA1A-235ENST00000637004 GNPDA1P46926 289 aa15.17■□□□□ 0.02
CACNA1A-235ENST00000637004 OLR1P78380 273 aa15.17■□□□□ 0.02
CACNA1A-235ENST00000637004 LRRC26Q2I0M4 334 aa15.17■□□□□ 0.02
CACNA1A-235ENST00000637004 CCDC58Q4VC31 144 aa15.17■□□□□ 0.02
CACNA1A-235ENST00000637004 PIK3R6Q5UE93 754 aa15.17■□□□□ 0.02
CACNA1A-235ENST00000637004 ZNF517Q6ZMY9 492 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-235ENST00000637004 CCDC190Q86UF4 302 aa15.17■□□□□ 0.02
CACNA1A-235ENST00000637004 RAB43Q86YS6 212 aa15.17■□□□□ 0.02
CACNA1A-235ENST00000637004 ENTHD1Q8IYW4 607 aa15.17■□□□□ 0.02
CACNA1A-235ENST00000637004 FLCNQ8NFG4 579 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms