RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 AGTRAPQ6RW13 159 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 ZNF574Q6ZN55 896 aaPredicted RBP15.47■□□□□ 0.07
CLN6-216ENST00000636876 TAX1BP1Q86VP1 789 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 SLITRK4Q8IW52 837 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 SRRM1Q8IYB3 904 aaKnown RBP15.47■□□□□ 0.07
CLN6-216ENST00000636876 COL27A1Q8IZC6 1860 aaPredicted RBP15.47■□□□□ 0.07
CLN6-216ENST00000636876 C4orf33Q8N1A6 199 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 SMPDL3AQ92484 453 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 ZBTB9Q96C00 473 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 PGM2Q96G03 612 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 ZDHHC12Q96GR4 267 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 CD180Q99467 661 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 EGFL8Q99944 293 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 CENPHQ9H3R5 247 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 NUDT4Q9NZJ9 180 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 PDP2Q9P2J9 529 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 DCDC2Q9UHG0 476 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 A0A1W2PPV9 198 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 SYCE1LA8MT33 242 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 ISM1B1AKI9 464 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 SUPT3HB4E1H0 165 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 E7ENX8 843 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 UBXN8O00124 270 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 PRICKLE3O43900 615 aaPredicted RBP15.46■□□□□ 0.07
CLN6-216ENST00000636876 GLRA3O75311 464 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 SUPT3HO75486 399 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 MYZAPP0CAP1 466 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 UGT2B7P16662 529 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 TAP2Q03519 686 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 ZFP36L1Q07352 338 aaKnown RBP15.46■□□□□ 0.07
CLN6-216ENST00000636876 TNFAIP8L3Q5GJ75 292 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 B3GNT8Q7Z7M8 397 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 LRRC56Q8IYG6 542 aaPredicted RBP15.46■□□□□ 0.07
CLN6-216ENST00000636876 PDPRQ8NCN5 879 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 PPFIBP2Q8ND30 876 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 FLVCR1-AS1Q8TAF5 88 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 EXT2Q93063 718 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 SLC22A18Q96BI1 424 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 RHBDF1Q96CC6 855 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 OR2A14Q96R47 310 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 MRPL57Q9BQC6 102 aaKnown RBP15.46■□□□□ 0.07
CLN6-216ENST00000636876 MRPL46Q9H2W6 279 aaKnown RBP15.46■□□□□ 0.07
CLN6-216ENST00000636876 SEMA6CQ9H3T2 930 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 VIPAS39Q9H9C1 493 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 MKS1Q9NXB0 559 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 CD274Q9NZQ7 290 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 SENP1Q9P0U3 644 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 XPR1Q9UBH6 696 aa15.46■□□□□ 0.07
CLN6-216ENST00000636876 IGHV5-10-1A0A0J9YXX1 117 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 TLCD2A6NGC4 264 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 NCF1BA6NI72 391 aaPredicted RBP15.45■□□□□ 0.06
CLN6-216ENST00000636876 NCF1CA8MVU1 366 aaPredicted RBP15.45■□□□□ 0.06
CLN6-216ENST00000636876 COPEO14579 308 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 KIF1CO43896 1103 aaKnown RBP15.45■□□□□ 0.06
CLN6-216ENST00000636876 S100BP04271 92 aaPredicted RBP15.45■□□□□ 0.06
CLN6-216ENST00000636876 THRAP10827 490 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 MTHFD2P13995 350 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 NCF1P14598 390 aaPredicted RBP15.45■□□□□ 0.06
CLN6-216ENST00000636876 MPSTP25325 297 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 OAS2P29728 719 aaKnown RBP15.45■□□□□ 0.06
CLN6-216ENST00000636876 PRDX3P30048 256 aaKnown RBP15.45■□□□□ 0.06
CLN6-216ENST00000636876 CRHR1P34998 444 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 RPA3P35244 121 aaPredicted RBP15.45■□□□□ 0.06
CLN6-216ENST00000636876 CCT5P48643 541 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 HNMTP50135 292 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 PDX1P52945 283 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 NAE1Q13564 534 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 TSTA3Q13630 321 aaPredicted RBP15.45■□□□□ 0.06
CLN6-216ENST00000636876 ZXDCQ2QGD7 858 aaPredicted RBP15.45■□□□□ 0.06
CLN6-216ENST00000636876 N4BP2L1Q5TBK1 243 aaPredicted RBP15.45■□□□□ 0.06
CLN6-216ENST00000636876 C16orf46Q6P387 395 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 SPESP1Q6UW49 350 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 SUSD1Q6UWL2 747 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 FAM92BQ6ZTR7 304 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 PRSS42Q7Z5A4 293 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 RAB44Q7Z6P3 723 aaPredicted RBP15.45■□□□□ 0.06
CLN6-216ENST00000636876 TMPRSS12Q86WS5 348 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 CACTIN-AS1Q8N1I8 211 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 TCAIMQ8N3R3 496 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 DCBLD1Q8N8Z6 715 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 OR56A3Q8NH54 315 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 CCDC74BQ96LY2 380 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 TMEM74Q96NL1 305 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 DEPDC7Q96QD5 511 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 SGPP1Q9BX95 441 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 ATG10Q9H0Y0 220 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 CCDC177Q9NQR7 707 aaPredicted RBP15.45■□□□□ 0.06
CLN6-216ENST00000636876 TMEM216Q9P0N5 145 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 KLHL3Q9UH77 587 aa15.45■□□□□ 0.06
CLN6-216ENST00000636876 GOLGA6L10A6NI86 522 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 AGPSO00116 658 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 TK2O00142 265 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 CSO75390 466 aaKnown RBP15.44■□□□□ 0.06
CLN6-216ENST00000636876 ADRB1P08588 477 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 CCND1P24385 295 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 PSMB5P28074 263 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 CCKBRP32239 447 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 INHBCP55103 352 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 TBPL1P62380 186 aa15.44■□□□□ 0.06
CLN6-216ENST00000636876 TRA2AQ13595 282 aaKnown RBP eCLIP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms