RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 BTG3Q14201 252 aaPredicted RBP13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 SKIV2LQ15477 1246 aaKnown RBP13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 PTCHD3Q3KNS1 767 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 ATP13A5Q4VNC0 1218 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 RUNDC3AQ59EK9 446 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 FAM180BQ6P0A1 224 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 ADHFE1Q8IWW8 467 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 STK40Q8N2I9 435 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 TMEFF2Q9UIK5 374 aaPredicted RBP13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 RIMKLBQ9ULI2 386 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 A0A0C4DFX4 3053 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 C16orf96A6NNT2 1141 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 NDUFS2O75306 463 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 MSH3P20585 1137 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 CYP4F8P98187 520 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 CDK5R2Q13319 367 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 GTF2IRD2BQ6EKJ0 949 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 PDE12Q6L8Q7 609 aaKnown RBP13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 SLC16A12Q6ZSM3 486 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 UBE2R2Q712K3 238 aaPredicted RBP13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 GTF2IRD2Q86UP8 949 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 ATG16L2Q8NAA4 619 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 OR52J3Q8NH60 311 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 RAB2BQ8WUD1 216 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 SPATA17Q96L03 361 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 PANX1Q96RD7 426 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 SACM1LQ9NTJ5 587 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 DCAF13Q9NV06 445 aaKnown RBP13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 PDP1Q9P0J1 537 aaPredicted RBP13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 C3orf18Q9UK00 162 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 DOCK6Q96HP0 2047 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 RANBP2P49792 3224 aaKnown RBP13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 OR2AG2A6NM03 316 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 TMEM189-UBE2V1I3L0A0 370 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 M0R3G1 203 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 CLDN9O95484 217 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 NADKO95544 446 aaPredicted RBP13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 OPN1SWP03999 348 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 C7P10643 843 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 CCR7P32248 378 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 NPTX1Q15818 432 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 RGS21Q2M5E4 152 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 PRR23BQ6ZRT6 265 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 ZNF540Q8NDQ6 660 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 ELMO1Q92556 727 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 CLMPQ9H6B4 373 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 ERVK-11Q9UQG0 969 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 SH3GLB1Q9Y371 365 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 OARD1Q9Y530 152 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 CPQQ9Y646 472 aa13.67□□□□□ -0.22
CACNA1A-228ENST00000636610 ZNF701M0R085 212 aaPredicted RBP13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 EPORP19235 508 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 TMBIM6P55061 237 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 VLDLRP98155 873 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 RELAQ04206 551 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 IRF5Q13568 498 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 USP39Q53GS9 565 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 AHSA2Q719I0 299 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 GPR156Q8NFN8 814 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 HDAC2Q92769 488 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 SCAMP4Q969E2 229 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 GORASP2Q9H8Y8 452 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 SERHLQ9NQF3 203 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 COL4A4P53420 1690 aaPredicted RBP13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 IL6P05231 212 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 LCKP06239 509 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 CKMP06732 381 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 ACRV1P26436 265 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 GSTM2P28161 218 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 DAPP51397 102 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 CYP4F2P78329 520 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 ADPRMQ3LIE5 342 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 GPRC6AQ5T6X5 926 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 LRRC66Q68CR7 880 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 GPR153Q6NV75 609 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 SNX20Q7Z614 316 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 LEMD2Q8NC56 503 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 RORBQ92753 470 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 KIF17Q9P2E2 1029 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 RBMX2Q9Y388 322 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 NINQ8N4C6 2090 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 PRAMEF4O60810 478 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 PQBP1O60828 265 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 VIPP01282 170 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 ENGP17813 658 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 SDC1P18827 310 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 CD70P32970 193 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 DGKKQ5KSL6 1271 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 PRAMEF9Q5VWM5 478 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 NEK5Q6P3R8 708 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 B3GNT8Q7Z7M8 397 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 FKBP10Q96AY3 582 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 MED8Q96G25 268 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 PYURFQ96I23 114 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 REXO4Q9GZR2 422 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 ZDHHC6Q9H6R6 413 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 MTRRQ9UBK8 725 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 SAMHD1Q9Y3Z3 626 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 PCDHB1Q9Y5F3 818 aa13.66□□□□□ -0.22
CACNA1A-228ENST00000636610 GMPPBQ9Y5P6 360 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms