RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 FN1P02751 2386 aaKnown RBP17.3■□□□□ 0.36
CLN6-212ENST00000636020 FITM1A5D6W6 292 aa17.29■□□□□ 0.36
CLN6-212ENST00000636020 LRRC10BA6NIK2 292 aa17.29■□□□□ 0.36
CLN6-212ENST00000636020 MYO1FO00160 1098 aa17.29■□□□□ 0.36
CLN6-212ENST00000636020 ASNA1O43681 348 aa17.29■□□□□ 0.36
CLN6-212ENST00000636020 CD68P34810 354 aaPredicted RBP17.29■□□□□ 0.36
CLN6-212ENST00000636020 EEF1A2Q05639 463 aaKnown RBP17.29■□□□□ 0.36
CLN6-212ENST00000636020 CEBPEQ15744 281 aa17.29■□□□□ 0.36
CLN6-212ENST00000636020 SLC1A5Q15758 541 aa17.29■□□□□ 0.36
CLN6-212ENST00000636020 FAM214AQ32MH5 1076 aa17.29■□□□□ 0.36
CLN6-212ENST00000636020 TCTE1Q5JU00 501 aa17.29■□□□□ 0.36
CLN6-212ENST00000636020 BIVMQ86UB2 503 aa17.29■□□□□ 0.36
CLN6-212ENST00000636020 AMER2Q8N7J2 671 aa17.29■□□□□ 0.36
CLN6-212ENST00000636020 MRGPRX2Q96LB1 330 aa17.29■□□□□ 0.36
CLN6-212ENST00000636020 OLFM3Q96PB7 478 aa17.29■□□□□ 0.36
CLN6-212ENST00000636020 THAP2Q9H0W7 228 aa17.29■□□□□ 0.36
CLN6-212ENST00000636020 ZNF304Q9HCX3 659 aa17.29■□□□□ 0.36
CLN6-212ENST00000636020 RIC8BQ9NVN3 520 aa17.29■□□□□ 0.36
CLN6-212ENST00000636020 AIPL1Q9NZN9 384 aa17.29■□□□□ 0.36
CLN6-212ENST00000636020 ZNF282Q9UDV7 671 aaPredicted RBP17.29■□□□□ 0.36
CLN6-212ENST00000636020 FKBPLQ9UIM3 349 aa17.29■□□□□ 0.36
CLN6-212ENST00000636020 ARL5AQ9Y689 179 aa17.29■□□□□ 0.36
CLN6-212ENST00000636020 IGLV3-12A0A075B6K2 115 aa17.28■□□□□ 0.36
CLN6-212ENST00000636020 TTI1O43156 1089 aa17.28■□□□□ 0.36
CLN6-212ENST00000636020 MED26O95402 600 aa17.28■□□□□ 0.36
CLN6-212ENST00000636020 HOXD4P09016 255 aaPredicted RBP17.28■□□□□ 0.36
CLN6-212ENST00000636020 CXCR2P25025 360 aa17.28■□□□□ 0.36
CLN6-212ENST00000636020 ACADLP28330 430 aa17.28■□□□□ 0.36
CLN6-212ENST00000636020 EMP2P54851 167 aa17.28■□□□□ 0.36
CLN6-212ENST00000636020 TAS2R40P59535 323 aa17.28■□□□□ 0.36
CLN6-212ENST00000636020 XIAPP98170 497 aa17.28■□□□□ 0.36
CLN6-212ENST00000636020 NEK10Q6ZWH5 1172 aa17.28■□□□□ 0.36
CLN6-212ENST00000636020 Q71RC1 249 aaPredicted RBP17.28■□□□□ 0.36
CLN6-212ENST00000636020 PRIMA1Q86XR5 153 aa17.28■□□□□ 0.36
CLN6-212ENST00000636020 SIAH3Q8IW03 269 aa17.28■□□□□ 0.36
CLN6-212ENST00000636020 TBC1D21Q8IYX1 336 aa17.28■□□□□ 0.36
CLN6-212ENST00000636020 TTC29Q8NA56 475 aaPredicted RBP17.28■□□□□ 0.36
CLN6-212ENST00000636020 RAPGEF5Q92565 580 aa17.28■□□□□ 0.36
CLN6-212ENST00000636020 COPS8Q99627 209 aa17.28■□□□□ 0.36
CLN6-212ENST00000636020 TRIM51Q9BSJ1 452 aa17.28■□□□□ 0.36
CLN6-212ENST00000636020 POLG2Q9UHN1 485 aa17.28■□□□□ 0.36
CLN6-212ENST00000636020 ST6GALNAC2Q9UJ37 374 aa17.28■□□□□ 0.36
CLN6-212ENST00000636020 CRLS1Q9UJA2 301 aa17.28■□□□□ 0.36
CLN6-212ENST00000636020 ASF1AQ9Y294 204 aa17.28■□□□□ 0.36
CLN6-212ENST00000636020 LUC7L2Q9Y383 392 aaKnown RBP17.28■□□□□ 0.36
CLN6-212ENST00000636020 COL6A5A8TX70 2615 aa17.28■□□□□ 0.36
CLN6-212ENST00000636020 ASPDHA6ND91 283 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 KIAA1324LA8MWY0 1029 aaPredicted RBP17.27■□□□□ 0.36
CLN6-212ENST00000636020 CFAP99D6REC4 459 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 TSPAN12O95859 305 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 KDELR1P24390 212 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 PTPN3P26045 913 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 MSX1P28360 303 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 GRIA3P42263 894 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 TNNT3P45378 269 aaPredicted RBP17.27■□□□□ 0.36
CLN6-212ENST00000636020 ADAM8P78325 824 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 ZNF33BQ06732 778 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 KLHL30Q0D2K2 578 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 ZC3H12BQ5HYM0 836 aaKnown RBP17.27■□□□□ 0.36
CLN6-212ENST00000636020 SLC9A4Q6AI14 798 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 ARHGEF18Q6ZSZ5 1173 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 APTXQ7Z2E3 356 aaKnown RBP17.27■□□□□ 0.36
CLN6-212ENST00000636020 EID3Q8N140 333 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 GHDCQ8N2G8 530 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 OR4K2Q8NGD2 314 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 LILRB4Q8NHJ6 448 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 SPATA3Q8NHX4 192 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 HEXDCQ8WVB3 486 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 ULK4Q96C45 1275 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 SMR3AQ99954 134 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 LIME1Q9H400 295 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 VPS37BQ9H9H4 285 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 PLAGL1Q9UM63 463 aa17.27■□□□□ 0.36
CLN6-212ENST00000636020 TDRKHQ9Y2W6 561 aaKnown RBP17.27■□□□□ 0.36
CLN6-212ENST00000636020 NKX2-6A6NCS4 301 aa17.26■□□□□ 0.35
CLN6-212ENST00000636020 IDSB3KWA1 339 aa17.26■□□□□ 0.35
CLN6-212ENST00000636020 PRRG2O14669 202 aa17.26■□□□□ 0.35
CLN6-212ENST00000636020 PPP1R12AO14974 1030 aaPredicted RBP17.26■□□□□ 0.35
CLN6-212ENST00000636020 TOXO94900 526 aa17.26■□□□□ 0.35
CLN6-212ENST00000636020 ZWINTO95229 277 aa17.26■□□□□ 0.35
CLN6-212ENST00000636020 CYP1A2P05177 515 aa17.26■□□□□ 0.35
CLN6-212ENST00000636020 SKILP12757 684 aa17.26■□□□□ 0.35
CLN6-212ENST00000636020 NFKB1P19838 968 aa17.26■□□□□ 0.35
CLN6-212ENST00000636020 AP2B1P63010 937 aa17.26■□□□□ 0.35
CLN6-212ENST00000636020 HSF1Q00613 529 aa17.26■□□□□ 0.35
CLN6-212ENST00000636020 PRMT9Q6P2P2 845 aa17.26■□□□□ 0.35
CLN6-212ENST00000636020 NPNTQ6UXI9 565 aa17.26■□□□□ 0.35
CLN6-212ENST00000636020 FGD2Q7Z6J4 655 aa17.26■□□□□ 0.35
CLN6-212ENST00000636020 MDS2Q8NDY4 140 aa17.26■□□□□ 0.35
CLN6-212ENST00000636020 OXNAD1Q96HP4 312 aaPredicted RBP17.26■□□□□ 0.35
CLN6-212ENST00000636020 FRMD6Q96NE9 622 aa17.26■□□□□ 0.35
CLN6-212ENST00000636020 SELENOSQ9BQE4 189 aa17.26■□□□□ 0.35
CLN6-212ENST00000636020 ZNF700Q9H0M5 742 aa17.26■□□□□ 0.35
CLN6-212ENST00000636020 FAM96AQ9H5X1 160 aa17.26■□□□□ 0.35
CLN6-212ENST00000636020 DNAJB12Q9NXW2 375 aaKnown RBP17.26■□□□□ 0.35
CLN6-212ENST00000636020 TEKT2Q9UIF3 430 aa17.26■□□□□ 0.35
CLN6-212ENST00000636020 ASB1Q9Y576 335 aa17.26■□□□□ 0.35
CLN6-212ENST00000636020 FBN1P35555 2871 aaKnown RBP17.26■□□□□ 0.35
CLN6-212ENST00000636020 IGLV3-16A0A075B6K0 115 aa17.25■□□□□ 0.35
CLN6-212ENST00000636020 LOC102723996A0A087X1L8 192 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms