RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 CEP19Q96LK0 163 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 RIT2Q99578 217 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 ALG12Q9BV10 488 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 SPATA5L1Q9BVQ7 753 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 SGPP1Q9BX95 441 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 IDI2Q9BXS1 227 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 HDAC8Q9BY41 377 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 KRTAP4-7Q9BYR0 210 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 FRMD8Q9BZ67 464 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 NAPBQ9H115 298 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 LDAHQ9H6V9 325 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 TMEM185BQ9H7F4 350 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 ROPN1Q9HAT0 212 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 PIH1D3Q9NQM4 214 aaKnown RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 CHRAC1Q9NRG0 131 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 C20orf141Q9NUB4 165 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 TMEM161AQ9NX61 479 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 XPR1Q9UBH6 696 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 PEMTQ9UBM1 199 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 RAPGEFL1Q9UHV5 662 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 TBC1D24Q9ULP9 559 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 SAMHD1Q9Y3Z3 626 aaKnown RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 NFE2L3Q9Y4A8 694 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 PCDHGB1Q9Y5G3 927 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 ACTL7AQ9Y615 435 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 SPATA31A1Q5TZJ5 1347 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 SPATA31A5Q5VU36 1347 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 SPATA31A7Q8IWB4 1347 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 ZNF541Q9H0D2 1346 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 NRXN3Q9Y4C0 1643 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 A0A0A6YYK5 440 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 GOLGA8QA0A0J9YX86 632 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 SHISA3A0PJX4 238 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 GXYLT2A0PJZ3 443 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 PRAMEF22A3QJZ6 481 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 OR6C70A6NIJ9 312 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 CD8B2A6NJW9 211 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 PPP6CO00743 305 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 DCLK1O15075 740 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 FGF10O15520 208 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 GDF9O60383 454 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 RAD17O75943 681 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 DFFBO76075 338 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 LRIG2O94898 1065 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 AHSA1O95433 338 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 NAMPTP43490 491 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 CHRNA4P43681 627 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 PCYT1AP49585 367 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 FHITP49789 147 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 CDH13P55290 713 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 RPS15P62841 145 aaKnown RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 CNTN2Q02246 1040 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 HSF2Q03933 536 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 GCKRQ14397 625 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 RRP1BQ14684 758 aaKnown RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 MFSD13AQ14CX5 517 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 SF3B4Q15427 424 aaKnown RBP eCLIP4.73□□□□□ -1.656e-7■■■■■ 30.8
SDCBP-213ENST00000630925 VWC2Q2TAL6 325 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 SPATS1Q496A3 300 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 LBHQ53QV2 105 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 PRAMEF5Q5TYX0 476 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 PRAMEF18Q5VWM3 479 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 PRAMEF6Q5VXH4 476 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 NKAIN2Q5VXU1 208 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 PLCXD3Q63HM9 321 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 FAM171BQ6P995 826 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 SEM1Q6ZVN7 128 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 ARID3BQ8IVW6 561 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 LRRC8AQ8IWT6 810 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 FAM58AQ8N1B3 248 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 BCORP1Q8N888 145 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 KBTBD3Q8NAB2 608 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 NUDT10Q8NFP7 164 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 LRRC20Q8TCA0 184 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 GPX8Q8TED1 209 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 OSTF1Q92882 214 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 CIDECQ96AQ7 238 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 RTP3Q9BQQ7 232 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 PAAF1Q9BRP4 392 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 PELOQ9BRX2 385 aaKnown RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 SOX7Q9BT81 388 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 ANGPTL4Q9BY76 406 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 IFIH1Q9BYX4 1025 aaKnown RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 DERL2Q9GZP9 239 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 APMAPQ9HDC9 416 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 PAG1Q9NWQ8 432 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 CLEC5AQ9NY25 188 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 AHSPQ9NZD4 102 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 GCNT4Q9P109 453 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 ATXN10Q9UBB4 475 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 IL17BQ9UHF5 180 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 NAGPAQ9UK23 515 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 EXO1Q9UQ84 846 aaKnown RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 CMAHPQ9Y471 501 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 INSL6Q9Y581 213 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 ASTN2O75129 1339 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-213ENST00000630925 CEP162Q5TB80 1403 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 ARHGEF5Q12774 1597 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 LOC100289279A0A1B0GTE1 492 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 MAGEA13PA6NCF6 341 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms