RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 PCDHB11Q9Y5F2 797 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 IFNA1P01562 189 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 RPS2P15880 293 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 SP2Q02086 613 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 AIMP2Q13155 320 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 NXPE1Q8N323 547 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 ZNF676Q8N7Q3 588 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 OR14C36Q8NHC7 312 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 IRGQQ8WZA9 623 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 GTPBP3Q969Y2 492 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 NALCNQ8IZF0 1738 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 RALGAPA1Q6GYQ0 2036 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 GNMTQ14749 295 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 SYCE2Q6PIF2 218 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 OR4K2Q8NGD2 314 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 IL17RBQ9NRM6 502 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 PTPRZ1P23471 2315 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 CXCR6O00574 342 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 GSTT2P0CG29 244 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 NSG1P42857 185 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 ZER1Q7Z7L7 766 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 SLC9A9Q8IVB4 645 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 KLHL6Q8WZ60 621 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 TSSK3Q96PN8 268 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 BCL9LQ86UU0 1499 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 PGLSO95336 258 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 AP2A1O95782 977 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 ITGB1P05556 798 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 E2F1Q01094 437 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 SCGB2B2Q4G0G5 96 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 PGM2L1Q6PCE3 622 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 LPGAT1Q92604 370 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 FLRT1Q9NZU1 646 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 ZSCAN5BA6NJL1 495 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 NAE1Q13564 534 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 SLC1A5Q15758 541 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 SGCBQ16585 318 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 PRPF38BQ5VTL8 546 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 GLYATQ6IB77 296 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 RALGPS2Q86X27 583 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 PFDN5Q99471 154 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 MIPEPQ99797 713 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 C11orf84Q9BUA3 381 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 UNC93B1Q9H1C4 597 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 MYNNQ9NPC7 610 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 POFUT2Q9Y2G5 429 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 MMP3P08254 477 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 PIRTP0C851 137 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 CCL23P55773 120 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 CRHR2Q13324 411 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 SCIMPQ6UWF3 145 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 FTMTQ8N4E7 242 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 MAB21L3Q8N8X9 362 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 SLC44A1Q8WWI5 657 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 RIOK2Q9BVS4 552 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 FN3KQ9H479 309 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 P2RX2Q9UBL9 471 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 SPTBN1Q01082 2364 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 ZNF878C9JN71 531 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 SEPT4O43236 478 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 NDUFS1P28331 727 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 GNG2P59768 71 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 MRPL49Q13405 166 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 FBXO15Q8NCQ5 510 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 S100A16Q96FQ6 103 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 LDAHQ9H6V9 325 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 DUS2Q9NX74 493 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 C19orf25Q9UFG5 118 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 BORCS7-ASMTA0A0B4J1R7 106 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 E9PAM4 449 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 UGT2B4P06133 528 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 FPGSQ05932 587 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 FAM43BQ6ZT52 329 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 SPPL2CQ8IUH8 684 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 C7orf61Q8IZ16 206 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 HDAC2Q92769 488 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 PMM1Q92871 262 aa12.92□□□□□ -0.34
SYNGAP1-208ENST00000629380 RAP2AP10114 183 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 SSTP61278 116 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 C12orf40Q86WS4 652 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 OR56A1Q8NGH5 318 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 TRAPPC12Q8WVT3 735 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 BORCS7Q96B45 105 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 NR2E1Q9Y466 385 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 MAFKO60675 156 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 EPHX1P07099 455 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 CCNCP24863 283 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 MERTKQ12866 999 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 SEMA5AQ13591 1074 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 WSCD2Q2TBF2 565 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 SPATA6LQ8N4H0 392 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 FCRL2Q96LA5 508 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 ITM2CQ9NQX7 267 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 CNTNAP1P78357 1384 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 HTR3EA5X5Y0 456 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 LCN1P31025 176 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 SMSP52788 366 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 SEC23BQ15437 767 aa12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 TAF1AQ15573 450 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-208ENST00000629380 GRK1Q15835 563 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms