RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 ZNF446Q9NWS9 450 aa11.17□□□□□ -0.62
PTPN7-219ENST00000629151 WWOXQ9NZC7 414 aa11.17□□□□□ -0.62
PTPN7-219ENST00000629151 PDP2Q9P2J9 529 aa11.17□□□□□ -0.62
PTPN7-219ENST00000629151 IKZF3Q9UKT9 509 aa11.17□□□□□ -0.62
PTPN7-219ENST00000629151 KCNE2Q9Y6J6 123 aa11.17□□□□□ -0.62
PTPN7-219ENST00000629151 LRP4O75096 1905 aa11.17□□□□□ -0.62
PTPN7-219ENST00000629151 ISM1B1AKI9 464 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 H3BQF6 201 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 BTN3A3O00478 584 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 PRICKLE3O43900 615 aaPredicted RBP11.16□□□□□ -0.62
PTPN7-219ENST00000629151 KATNA1O75449 491 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 STK16O75716 305 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 SASH3O75995 380 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 DKK1O94907 266 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 MYL2P10916 166 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 MYF5P13349 255 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 TYRP1P17643 537 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 CMPK1P30085 196 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 NOVA1P51513 510 aaKnown RBP11.16□□□□□ -0.62
PTPN7-219ENST00000629151 CCL7P80098 99 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 SIM1P81133 766 aaPredicted RBP11.16□□□□□ -0.62
PTPN7-219ENST00000629151 RELAQ04206 551 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 NAE1Q13564 534 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 SETDB1Q15047 1291 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 SF1Q15637 639 aaKnown RBP11.16□□□□□ -0.62
PTPN7-219ENST00000629151 PFKFB4Q16877 469 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 RSPO4Q2I0M5 234 aaPredicted RBP11.16□□□□□ -0.62
PTPN7-219ENST00000629151 AMZ1Q400G9 498 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 LCTLQ6UWM7 567 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 ZYG11AQ6WRX3 759 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 LRRC70Q7Z2Q7 622 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 ALYREFQ86V81 257 aaKnown RBP11.16□□□□□ -0.62
PTPN7-219ENST00000629151 ZNF761Q86XN6 746 aaPredicted RBP11.16□□□□□ -0.62
PTPN7-219ENST00000629151 LRRC56Q8IYG6 542 aaPredicted RBP11.16□□□□□ -0.62
PTPN7-219ENST00000629151 LMNTD1Q8N9Z9 388 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 LINC01555Q8NAE3 123 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 TCP10LQ8TDR4 215 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 MAGEB10Q96LZ2 347 aaPredicted RBP11.16□□□□□ -0.62
PTPN7-219ENST00000629151 UNKQ9C0B0 810 aaKnown RBP11.16□□□□□ -0.62
PTPN7-219ENST00000629151 CHRNA10Q9GZZ6 450 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 ZMYND15Q9H091 742 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 XKR8Q9H6D3 395 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 C1GALT1Q9NS00 363 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 DLL3Q9NYJ7 618 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 NKIRAS1Q9NYS0 192 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 ACTR10Q9NZ32 417 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 GPRC5BQ9NZH0 403 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 AKAP7Q9P0M2 348 aaPredicted RBP11.16□□□□□ -0.62
PTPN7-219ENST00000629151 CPSF2Q9P2I0 782 aaKnown RBP11.16□□□□□ -0.62
PTPN7-219ENST00000629151 ANKMY1Q9P2S6 941 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 POMT2Q9UKY4 750 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 PLAGL1Q9UM63 463 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 STK38LQ9Y2H1 464 aa11.16□□□□□ -0.62
PTPN7-219ENST00000629151 COL5A1P20908 1838 aaPredicted RBP11.16□□□□□ -0.62
PTPN7-219ENST00000629151 KNL1Q8NG31 2342 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 MN1Q10571 1320 aaPredicted RBP11.15□□□□□ -0.62
PTPN7-219ENST00000629151 A0A1W2PQM1 296 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 GSAPA4D1B5 854 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 TLCD2A6NGC4 264 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 UBXN8O00124 270 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 BIRC5O15392 142 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 CAPN5O15484 640 aaPredicted RBP11.15□□□□□ -0.62
PTPN7-219ENST00000629151 SPAG7O75391 227 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 KCNK5O95279 499 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 ANKRD34CP0C6C1 535 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 EPB42P16452 691 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 POLR2CP19387 275 aaPredicted RBP11.15□□□□□ -0.62
PTPN7-219ENST00000629151 IMPDH1P20839 514 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 PRDX3P30048 256 aaKnown RBP11.15□□□□□ -0.62
PTPN7-219ENST00000629151 SLC6A12P48065 614 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 DNAJB13P59910 316 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 PRDX1Q06830 199 aaKnown RBP11.15□□□□□ -0.62
PTPN7-219ENST00000629151 PCDH1Q08174 1060 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 PUM1Q14671 1186 aaKnown RBP eCLIP11.15□□□□□ -0.625e-6■□□□□ 10.2
PTPN7-219ENST00000629151 PTCHD3Q3KNS1 767 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 THEMIS2Q5TEJ8 643 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 IRGCQ6NXR0 463 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 CYB5D1Q6P9G0 228 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 SPESP1Q6UW49 350 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 RBM44Q6ZP01 1051 aaKnown RBP11.15□□□□□ -0.62
PTPN7-219ENST00000629151 CDHR3Q6ZTQ4 885 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 USP53Q70EK8 1073 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 PRSS42Q7Z5A4 293 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 C17orf64Q86WR6 236 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 TMPRSS12Q86WS5 348 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 OR2A1Q8NGT9 310 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 ARL8AQ96BM9 186 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 MED8Q96G25 268 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 IL17FQ96PD4 163 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 OR2A14Q96R47 310 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 C1QTNF3Q9BXJ4 246 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 PITPNM3Q9BZ71 974 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 PITHD1Q9GZP4 211 aaPredicted RBP11.15□□□□□ -0.62
PTPN7-219ENST00000629151 ATG10Q9H0Y0 220 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 SEMA6CQ9H3T2 930 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 DNAJC11Q9NVH1 559 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 OGFRQ9NZT2 677 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 SEMA5BQ9P283 1151 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 COPG2Q9UBF2 871 aa11.15□□□□□ -0.62
PTPN7-219ENST00000629151 OPTCQ9UBM4 332 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms