RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 TLDC1Q6P9B6 456 aa12.97□□□□□ -0.33
SOX2-OT-241ENST00000626948 TTLL10Q6ZVT0 673 aa12.97□□□□□ -0.33
SOX2-OT-241ENST00000626948 NLRP9Q7RTR0 991 aa12.97□□□□□ -0.33
SOX2-OT-241ENST00000626948 HOOK3Q86VS8 718 aa12.97□□□□□ -0.33
SOX2-OT-241ENST00000626948 RAB43Q86YS6 212 aa12.97□□□□□ -0.33
SOX2-OT-241ENST00000626948 MPP5Q8N3R9 675 aa12.97□□□□□ -0.33
SOX2-OT-241ENST00000626948 PPHLN1Q8NEY8 458 aaKnown RBP12.97□□□□□ -0.33
SOX2-OT-241ENST00000626948 OR2A1Q8NGT9 310 aa12.97□□□□□ -0.33
SOX2-OT-241ENST00000626948 LPGAT1Q92604 370 aa12.97□□□□□ -0.33
SOX2-OT-241ENST00000626948 PNPLA2Q96AD5 504 aa12.97□□□□□ -0.33
SOX2-OT-241ENST00000626948 SNRNP40Q96DI7 357 aaKnown RBP12.97□□□□□ -0.33
SOX2-OT-241ENST00000626948 KIFC1Q9BW19 673 aa12.97□□□□□ -0.33
SOX2-OT-241ENST00000626948 IL1RAPL1Q9NZN1 696 aa12.97□□□□□ -0.33
SOX2-OT-241ENST00000626948 STOX2Q9P2F5 926 aaPredicted RBP12.97□□□□□ -0.33
SOX2-OT-241ENST00000626948 MED16Q9Y2X0 877 aa12.97□□□□□ -0.33
SOX2-OT-241ENST00000626948 LOC105369274A0A096LPK9 316 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 LOC102723532A0A0G2JNH3 316 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 FITM1A5D6W6 292 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 SOCS6O14544 535 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 DPM1O60762 260 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 VPS4BO75351 444 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 S1PR4O95977 384 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 FGGP02679 453 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 APOA4P06727 396 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 CXCR5P32302 372 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 FOLR3P41439 243 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 SOX8P57073 446 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 BASP1P80723 227 aaKnown RBP12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 MYBPC3Q14896 1274 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 NKG7Q16617 165 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 TYSND1Q2T9J0 566 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 EIF2S3LQ2VIR3 472 aaKnown RBP12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 ANKRD22Q5VYY1 191 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 TTC27Q6P3X3 843 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 SHISA6Q6ZSJ9 500 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 OVCH1Q7RTY7 1134 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 OR4N4Q8N0Y3 316 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 SHISA5Q8N114 240 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 AGGF1Q8N302 714 aaeCLIP12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 TXLNBQ8N3L3 684 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 GALNT16Q8N428 558 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 METTL27Q8N6F8 245 aaPredicted RBP12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 PRELID2Q8N945 189 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 CCDC89Q8N998 374 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 N4BP2L2Q92802 583 aaPredicted RBP12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 PTERQ96BW5 349 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 FAM136AQ96C01 138 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 SLC30A3Q99726 388 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 SLC6A20Q9NP91 592 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 LZTFL1Q9NQ48 299 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 CTSFQ9UBX1 484 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 TSR3Q9UJK0 312 aaKnown RBP12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 TTC7AQ9ULT0 858 aaPredicted RBP12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 VPS4AQ9UN37 437 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 SRPK3Q9UPE1 567 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 PADI2Q9Y2J8 665 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 KLK4Q9Y5K2 254 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 HS3ST3B1Q9Y662 390 aa12.96□□□□□ -0.33
SOX2-OT-241ENST00000626948 HEATR5BQ9P2D3 2071 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 CRYBG3Q68DQ2 2970 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 IGKV1-8A0A0C4DH67 115 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 A0A1B0GX78 115 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 MAP3K7O43318 606 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 VAPBO95292 243 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 MATN4O95460 622 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 GAS8O95995 478 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 ALAS2P22557 587 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 OR1D4P47884 311 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 TTPAP49638 278 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 TERF1P54274 439 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 RRADP55042 308 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 EIF3BP55884 814 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 Q0VFX4 171 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 KCNJ11Q14654 390 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 SF1Q15637 639 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 TRIP13Q15645 432 aaPredicted RBP12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 VWA5B1Q5TIE3 1220 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 PTRHD1Q6GMV3 140 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 CNSTQ6PJW8 725 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 KIRREL2Q6UWL6 708 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 IGFL3Q6UXB1 125 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 ZNF662Q6ZS27 426 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 CENPUQ71F23 418 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 CAND1Q86VP6 1230 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 OR2L3Q8NG85 312 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 HMGCLL1Q8TB92 370 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 TTC1Q99614 292 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 BARD1Q99728 777 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 MIPEPQ99797 713 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 NDC1Q9BTX1 674 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 TSGA10Q9BZW7 698 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 IL22Q9GZX6 179 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 SLC26A1Q9H2B4 701 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 CUTCQ9NTM9 273 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 TXLNGQ9NUQ3 528 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 ASF1BQ9NVP2 202 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 C5AR2Q9P296 337 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 NDOR1Q9UHB4 597 aa12.95□□□□□ -0.34
SOX2-OT-241ENST00000626948 CELSR2Q9HCU4 2923 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms