RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 DMGDHQ9UI17 866 aaKnown RBP13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 PCDHB3Q9Y5E6 796 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 KLK4Q9Y5K2 254 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 AP1M2Q9Y6Q5 423 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 ADAMTS20P59510 1910 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 ASPMQ8IZT6 3477 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 DMXL2Q8TDJ6 3036 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 ZNF500O60304 480 aaPredicted RBP13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 RAD1O60671 282 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 CPNE3O75131 537 aaKnown RBP13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 CCNYL3P0C7X3 344 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 EBLN1P0CF75 366 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 TPBGLP0DKB5 382 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 ST6GAL1P15907 406 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 STMN1P16949 149 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 HRH2P25021 359 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 RPA3P35244 121 aaPredicted RBP13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 PNLIPRP1P54315 467 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 CDKN2DP55273 166 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 SH3BP2P78314 561 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 ABATP80404 500 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 ABHD18Q0P651 414 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 CYHR1Q6ZMK1 362 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 ADAMTSL2Q86TH1 951 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 SYTL1Q8IYJ3 562 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 CACNA2D3Q8IZS8 1091 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 LINC01555Q8NAE3 123 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 ZNF501Q96CX3 271 aaPredicted RBP13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 LRFN5Q96NI6 719 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 GPR22Q99680 433 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 SLC30A3Q99726 388 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 C17orf62Q9BQA9 187 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 DPH2Q9BQC3 489 aaPredicted RBP13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 MCMBPQ9BTE3 642 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 GPAMQ9HCL2 828 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 PILRAQ9UKJ1 303 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 PLAGL1Q9UM63 463 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 NOVA2Q9UNW9 492 aaKnown RBP13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 SRPK3Q9UPE1 567 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 PSAT1Q9Y617 370 aa13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 KMT2BQ9UMN6 2715 aaPredicted RBP13.51□□□□□ -0.25
SNRPA1-216ENST00000626000 CCDC189A1A4V9 331 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 AGRPO00253 132 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 DLGAP3O95886 979 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 SLC16A8O95907 504 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 SYF2O95926 243 aaKnown RBP13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 FOLR1P15328 257 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 ITGA1P56199 1179 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 GPX6P59796 221 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 MC1RQ01726 317 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 RELAQ04206 551 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 KBTBD12Q3ZCT8 623 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 TLDC1Q6P9B6 456 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 C6orf15Q6UXA7 325 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 CCDC81Q6ZN84 652 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 PIWIL4Q7Z3Z4 852 aaKnown RBP13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 ZFAND4Q86XD8 727 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 TMEM126BQ8IUX1 230 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 PPM1NQ8N819 430 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 FLVCR1-AS1Q8TAF5 88 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 FBF1Q8TES7 1133 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 EEF1AKMT1Q8WVE0 214 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 NKD1Q969G9 470 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 PKP4Q99569 1192 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 CTRCQ99895 268 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 FUT8Q9BYC5 575 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 SPRY4Q9C004 299 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 SLC7A5P2Q9GIP4 190 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 ACSS3Q9H6R3 686 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 SPHK1Q9NYA1 384 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 TSR3Q9UJK0 312 aaKnown RBP13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 PLCL2Q9UPR0 1127 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 RUVBL2Q9Y230 463 aaKnown RBP13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 IKBKGQ9Y6K9 419 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 PKD1L2Q7Z442 2459 aa13.5□□□□□ -0.25
SNRPA1-216ENST00000626000 E7EQ34 232 aa13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 PRICKLE3O43900 615 aaPredicted RBP13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 SCRG1O75711 98 aa13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 KLK3P07288 261 aaPredicted RBP13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 CD63P08962 238 aa13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 CRABP2P29373 138 aa13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 SLC26A3P40879 764 aa13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 ATP6V0D1P61421 351 aa13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 VAC14Q08AM6 782 aa13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 USP10Q14694 798 aaKnown RBP13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 KCNAB1Q14722 419 aa13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 TRADDQ15628 312 aa13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 TCTE1Q5JU00 501 aa13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 YOD1Q5VVQ6 348 aaPredicted RBP13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 TRMT10CQ7L0Y3 403 aaKnown RBP13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 OR2L3Q8NG85 312 aa13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 OR2A1Q8NGT9 310 aa13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 ZNF480Q8WV37 535 aa13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 SNRNP27Q8WVK2 155 aaKnown RBP13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 DLG3Q92796 817 aa13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 NAF1Q96HR8 494 aaKnown RBP13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 IL17FQ96PD4 163 aa13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 APMAPQ9HDC9 416 aa13.49□□□□□ -0.25
SNRPA1-216ENST00000626000 CCDC177Q9NQR7 707 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms