RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 SNRNP200O75643 2136 aaKnown RBP13.24□□□□□ -0.29
SNX1-214ENST00000625244 A0A1W2PQ72 361 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 ASPDHA6ND91 283 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 LRRC10BA6NIK2 292 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 TTI1O43156 1089 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 CHRNB4P30926 498 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 IFI35P80217 286 aaPredicted RBP13.23□□□□□ -0.29
SNX1-214ENST00000625244 FANCCQ00597 558 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 SLC25A11Q02978 314 aaKnown RBP13.23□□□□□ -0.29
SNX1-214ENST00000625244 ITGA9Q13797 1035 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 RIPOR1Q6ZS17 1223 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 EID3Q8N140 333 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 GHDCQ8N2G8 530 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 RNF214Q8ND24 703 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 NEK11Q8NG66 645 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 DENND1AQ8TEH3 1009 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 ASB5Q8WWX0 329 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 HDAC10Q969S8 669 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 MIEF2Q96C03 454 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 FRMD6Q96NE9 622 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 SIGLEC12Q96PQ1 595 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 SRPK1Q96SB4 655 aaKnown RBP13.23□□□□□ -0.29
SNX1-214ENST00000625244 SYT11Q9BT88 431 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 HSD3B7Q9H2F3 369 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 CLEC4MQ9H2X3 399 aaPredicted RBP13.23□□□□□ -0.29
SNX1-214ENST00000625244 COG4Q9H9E3 785 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 HRH3Q9Y5N1 445 aa13.23□□□□□ -0.29
SNX1-214ENST00000625244 FAM237BA0A1B0GVD1 139 aa13.22□□□□□ -0.29
SNX1-214ENST00000625244 IFRD1O00458 451 aaPredicted RBP13.22□□□□□ -0.29
SNX1-214ENST00000625244 CBFA2T2O43439 604 aa13.22□□□□□ -0.29
SNX1-214ENST00000625244 MED26O95402 600 aa13.22□□□□□ -0.29
SNX1-214ENST00000625244 TPBGLP0DKB5 382 aa13.22□□□□□ -0.29
SNX1-214ENST00000625244 PEBP1P30086 187 aaKnown RBP13.22□□□□□ -0.29
SNX1-214ENST00000625244 ST13P50502 369 aaKnown RBP13.22□□□□□ -0.29
SNX1-214ENST00000625244 ARSEP51690 589 aa13.22□□□□□ -0.29
SNX1-214ENST00000625244 UBASH3AP57075 661 aa13.22□□□□□ -0.29
SNX1-214ENST00000625244 OCA2Q04671 838 aa13.22□□□□□ -0.29
SNX1-214ENST00000625244 DPYSL3Q14195 570 aa13.22□□□□□ -0.29
SNX1-214ENST00000625244 PTPRCAPQ14761 206 aa13.22□□□□□ -0.29
SNX1-214ENST00000625244 FAM71BQ8TC56 605 aa13.22□□□□□ -0.29
SNX1-214ENST00000625244 ZNF398Q8TD17 642 aa13.22□□□□□ -0.29
SNX1-214ENST00000625244 TFGQ92734 400 aaPredicted RBP13.22□□□□□ -0.29
SNX1-214ENST00000625244 GPATCH1Q9BRR8 931 aaKnown RBP13.22□□□□□ -0.29
SNX1-214ENST00000625244 SLC25A51Q9H1U9 297 aa13.22□□□□□ -0.29
SNX1-214ENST00000625244 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.22□□□□□ -0.29
SNX1-214ENST00000625244 ADAM21Q9UKJ8 722 aa13.22□□□□□ -0.29
SNX1-214ENST00000625244 KLK8O60259 260 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 FTLP02792 175 aaPredicted RBP13.21□□□□□ -0.29
SNX1-214ENST00000625244 MX2P20592 715 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 MAGP20916 626 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 HOXC12P31275 282 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 SHMT2P34897 504 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 CD151P48509 253 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 PRLHRP49683 370 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 YBX1P67809 324 aaKnown RBP13.21□□□□□ -0.29
SNX1-214ENST00000625244 GRM7Q14831 915 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 ZNF658BQ4V348 819 aaPredicted RBP13.21□□□□□ -0.29
SNX1-214ENST00000625244 YOD1Q5VVQ6 348 aaPredicted RBP13.21□□□□□ -0.29
SNX1-214ENST00000625244 CCDC70Q6NSX1 233 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 CCDC71Q8IV32 467 aaPredicted RBP13.21□□□□□ -0.29
SNX1-214ENST00000625244 ZZZ3Q8IYH5 903 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 MDS2Q8NDY4 140 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 ACRBPQ8NEB7 543 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 OR5AR1Q8NGP9 310 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 PWWP2AQ96N64 755 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 ERGIC2Q96RQ1 377 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 TRABDQ9H4I3 376 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 SLC24A3Q9HC58 644 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 RTN4Q9NQC3 1192 aaKnown RBP13.21□□□□□ -0.29
SNX1-214ENST00000625244 RIC8BQ9NVN3 520 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 UBP1Q9NZI7 540 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 IL1RAPL1Q9NZN1 696 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 ZNF282Q9UDV7 671 aaPredicted RBP13.21□□□□□ -0.29
SNX1-214ENST00000625244 L3MBTL1Q9Y468 752 aa13.21□□□□□ -0.29
SNX1-214ENST00000625244 A0A1B0GTH6 734 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 ISM1B1AKI9 464 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 TPOP07202 933 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 EEF1DP29692 281 aaKnown RBP13.2□□□□□ -0.3
SNX1-214ENST00000625244 PTGER1P34995 402 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 GRIA3P42263 894 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 EMP2P54851 167 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 DLX5P56178 289 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 PPIDQ08752 370 aaKnown RBP13.2□□□□□ -0.3
SNX1-214ENST00000625244 TUBA3CQ13748 450 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 RNFT1Q5M7Z0 435 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 FCRLBQ6BAA4 426 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 SPINK14Q6IE38 97 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 PPP1R2P3Q6NXS1 205 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 TUBA3EQ6PEY2 450 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 KDELC1Q6UW63 502 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 CAMKMTQ7Z624 323 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 KRTAP1-3Q8IUG1 177 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 BEST3Q8N1M1 668 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 RPRMLQ8N4K4 120 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 PQLC3Q8N755 202 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 SCMH1Q96GD3 660 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 BTBD6Q96KE9 485 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 ZNF304Q9HCX3 659 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 RASSF1Q9NS23 344 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 ANKRD10Q9NXR5 420 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms