RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 SLC35A5Q9BS91 424 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 SCN2BO60939 215 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 PRSS56P0CW18 603 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 ELK4P28324 431 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 DSC3Q14574 896 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 TTLL2Q9BWV7 592 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 LOC100130705A0A1B0GUX0 176 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 ARVCFO00192 962 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 KHDRBS3O75525 346 aaKnown RBP15.78■□□□□ 0.12
GABRB3-215ENST00000622697 CD1DP15813 335 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 PTPN2P17706 415 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 BEND7Q8N7W2 519 aaPredicted RBP15.78■□□□□ 0.12
GABRB3-215ENST00000622697 OR2AP1Q8NGE2 309 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 MAPK15Q8TD08 544 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 LMLNQ96KR4 655 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 TMEM138Q9NPI0 162 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 ZNF282Q9UDV7 671 aaPredicted RBP15.78■□□□□ 0.12
GABRB3-215ENST00000622697 FAM240BA0A1B0GVZ2 78 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 A0A1W2PPW3 197 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.78■□□□□ 0.12
GABRB3-215ENST00000622697 KLK1P06870 262 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 RCVRNP35243 200 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 RPS6KA3P51812 740 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 PTGR1Q14914 329 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 HEPACAMQ14CZ8 416 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 TIGD6Q17RP2 521 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 RFTN2Q52LD8 501 aaPredicted RBP15.78■□□□□ 0.12
GABRB3-215ENST00000622697 COLEC12Q5KU26 742 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 SNAP47Q5SQN1 464 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 NANOGP8Q6NSW7 305 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 PKP4Q99569 1192 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 TOR3AQ9H497 397 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 NANOGQ9H9S0 305 aa15.78■□□□□ 0.12
GABRB3-215ENST00000622697 MRM3Q9HC36 420 aaKnown RBP15.78■□□□□ 0.12
GABRB3-215ENST00000622697 NLE1Q9NVX2 485 aaPredicted RBP15.78■□□□□ 0.12
GABRB3-215ENST00000622697 RASGRP1O95267 797 aa15.77■□□□□ 0.12
GABRB3-215ENST00000622697 CD247P20963 164 aa15.77■□□□□ 0.12
GABRB3-215ENST00000622697 UNC50Q53HI1 259 aa15.77■□□□□ 0.12
GABRB3-215ENST00000622697 SLC38A4Q969I6 547 aa15.77■□□□□ 0.12
GABRB3-215ENST00000622697 IMP4Q96G21 291 aaKnown RBP15.77■□□□□ 0.12
GABRB3-215ENST00000622697 FAM189A1O60320 539 aa15.77■□□□□ 0.12
GABRB3-215ENST00000622697 CREG1O75629 220 aa15.77■□□□□ 0.12
GABRB3-215ENST00000622697 LEPRP48357 1165 aaKnown RBP15.77■□□□□ 0.12
GABRB3-215ENST00000622697 PLET1Q6UQ28 207 aa15.77■□□□□ 0.12
GABRB3-215ENST00000622697 GALNT13Q8IUC8 556 aa15.77■□□□□ 0.12
GABRB3-215ENST00000622697 NARS2Q96I59 477 aaKnown RBP15.77■□□□□ 0.12
GABRB3-215ENST00000622697 CAPNS2Q96L46 248 aa15.77■□□□□ 0.12
GABRB3-215ENST00000622697 TSGA13Q96PP4 275 aa15.77■□□□□ 0.12
GABRB3-215ENST00000622697 MAGEE1Q9HCI5 957 aa15.77■□□□□ 0.12
GABRB3-215ENST00000622697 ZSCAN32Q9NX65 697 aa15.77■□□□□ 0.12
GABRB3-215ENST00000622697 SNNO75324 88 aaPredicted RBP15.77■□□□□ 0.11
GABRB3-215ENST00000622697 LAMP2P13473 410 aa15.77■□□□□ 0.11
GABRB3-215ENST00000622697 ZNF33AQ06730 810 aa15.77■□□□□ 0.11
GABRB3-215ENST00000622697 PRR23CQ6ZRP0 262 aa15.77■□□□□ 0.11
GABRB3-215ENST00000622697 GPATCH1Q9BRR8 931 aaKnown RBP15.77■□□□□ 0.11
GABRB3-215ENST00000622697 PRDM8Q9NQV8 689 aa15.77■□□□□ 0.11
GABRB3-215ENST00000622697 MYH7BA7E2Y1 1941 aa15.77■□□□□ 0.11
GABRB3-215ENST00000622697 UPK3BL1B0FP48 263 aa15.77■□□□□ 0.11
GABRB3-215ENST00000622697 UPK3BL2E5RIL1 263 aa15.77■□□□□ 0.11
GABRB3-215ENST00000622697 SNAP29O95721 258 aa15.77■□□□□ 0.11
GABRB3-215ENST00000622697 ITPKBP27987 946 aa15.77■□□□□ 0.11
GABRB3-215ENST00000622697 CBX3Q13185 183 aa15.77■□□□□ 0.11
GABRB3-215ENST00000622697 TOMM20Q15388 145 aa15.77■□□□□ 0.11
GABRB3-215ENST00000622697 TAF13Q15543 124 aa15.77■□□□□ 0.11
GABRB3-215ENST00000622697 C6orf136Q5SQH8 315 aa15.77■□□□□ 0.11
GABRB3-215ENST00000622697 STEAP4Q687X5 459 aa15.77■□□□□ 0.11
GABRB3-215ENST00000622697 PACRGLQ8N7B6 248 aa15.77■□□□□ 0.11
GABRB3-215ENST00000622697 ZNF433Q8N7K0 673 aaPredicted RBP15.77■□□□□ 0.11
GABRB3-215ENST00000622697 C12orf66Q96MD2 445 aa15.77■□□□□ 0.11
GABRB3-215ENST00000622697 TRMT61BQ9BVS5 477 aaKnown RBP15.77■□□□□ 0.11
GABRB3-215ENST00000622697 TIAM2Q8IVF5 1701 aa15.76■□□□□ 0.11
GABRB3-215ENST00000622697 PDPK1O15530 556 aa15.76■□□□□ 0.11
GABRB3-215ENST00000622697 S1PR4O95977 384 aa15.76■□□□□ 0.11
GABRB3-215ENST00000622697 RPLP0P05388 317 aaKnown RBP15.76■□□□□ 0.11
GABRB3-215ENST00000622697 ATP1B2P14415 290 aaPredicted RBP15.76■□□□□ 0.11
GABRB3-215ENST00000622697 PIGFQ07326 219 aa15.76■□□□□ 0.11
GABRB3-215ENST00000622697 GPR17Q13304 367 aa15.76■□□□□ 0.11
GABRB3-215ENST00000622697 CYP27C1Q4G0S4 372 aa15.76■□□□□ 0.11
GABRB3-215ENST00000622697 OR2T5Q6IEZ7 315 aa15.76■□□□□ 0.11
GABRB3-215ENST00000622697 LGI4Q8N135 537 aa15.76■□□□□ 0.11
GABRB3-215ENST00000622697 OR2T29Q8NH02 315 aa15.76■□□□□ 0.11
GABRB3-215ENST00000622697 LRCH3Q96II8 777 aa15.76■□□□□ 0.11
GABRB3-215ENST00000622697 DNAAF2Q9NVR5 837 aaKnown RBP15.76■□□□□ 0.11
GABRB3-215ENST00000622697 LDB2O43679 373 aa15.76■□□□□ 0.11
GABRB3-215ENST00000622697 ONECUT3O60422 494 aaPredicted RBP15.76■□□□□ 0.11
GABRB3-215ENST00000622697 MBOAT1Q6ZNC8 495 aa15.76■□□□□ 0.11
GABRB3-215ENST00000622697 SYVN1Q86TM6 617 aa15.76■□□□□ 0.11
GABRB3-215ENST00000622697 ADGRG2Q8IZP9 1017 aa15.76■□□□□ 0.11
GABRB3-215ENST00000622697 LRRC17Q8N6Y2 441 aa15.76■□□□□ 0.11
GABRB3-215ENST00000622697 RPRD1BQ9NQG5 326 aaKnown RBP15.76■□□□□ 0.11
GABRB3-215ENST00000622697 FNIP2Q9P278 1114 aa15.76■□□□□ 0.11
GABRB3-215ENST00000622697 NFATC1O95644 943 aa15.76■□□□□ 0.11
GABRB3-215ENST00000622697 DNAJA1P31689 397 aaKnown RBP15.76■□□□□ 0.11
GABRB3-215ENST00000622697 FAM86C2PA6NEL3 165 aa15.76■□□□□ 0.11
GABRB3-215ENST00000622697 PAPSS2O95340 614 aaPredicted RBP15.76■□□□□ 0.11
GABRB3-215ENST00000622697 RBM48Q5RL73 367 aaKnown RBP15.76■□□□□ 0.11
GABRB3-215ENST00000622697 LAPTM4BQ86VI4 370 aa15.76■□□□□ 0.11
GABRB3-215ENST00000622697 THOC6Q86W42 341 aaKnown RBP15.76■□□□□ 0.11
GABRB3-215ENST00000622697 KRTCAP2Q8N6L1 136 aa15.76■□□□□ 0.11
GABRB3-215ENST00000622697 MKS1Q9NXB0 559 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms