RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 DEFB126Q9BYW3 111 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 USP29Q9HBJ7 922 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 SLAMF7Q9NQ25 335 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 MAPRE3Q9UPY8 281 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 TRAF6Q9Y4K3 522 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 MAU2Q9Y6X3 613 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 KLHL33A6NCF5 533 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 E7EQ34 232 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 TCEA3O75764 348 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 FHP07954 510 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 PRSS56P0CW18 603 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 COL6A2P12110 1019 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 NOS3P29474 1203 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 PGM1P36871 562 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 KCNJ5P48544 419 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 CASP6P55212 293 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 NUP107P57740 925 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 SGCBQ16585 318 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 CUZD1Q86UP6 607 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 NUDT13Q86X67 352 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 PPP1R3BQ86XI6 285 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 KCNJ9Q92806 393 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 TPD52L3Q96J77 140 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 TMEM237Q96Q45 408 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 TM9SF3Q9HD45 589 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 EXD2Q9NVH0 621 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 SBF1O95248 1867 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 CAPN5O15484 640 aaPredicted RBP8.84□□□□□ -0.99
HDAC9-229ENST00000622668 GPR39O43194 453 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 SIX3O95343 332 aaPredicted RBP8.84□□□□□ -0.99
HDAC9-229ENST00000622668 ABHD2P08910 425 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 NAA20P61599 178 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 E2F1Q01094 437 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 ZNF844Q08AG5 666 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 MANEAQ5SRI9 462 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 PLEKHS1Q5SXH7 462 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 KRT80Q6KB66 452 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 SPATS2Q86XZ4 545 aaKnown RBP8.84□□□□□ -0.99
HDAC9-229ENST00000622668 CENPLQ8N0S6 344 aaPredicted RBP8.84□□□□□ -0.99
HDAC9-229ENST00000622668 NAT8LQ8N9F0 302 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 LRRN4CLQ8ND94 238 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 SLC5A11Q8WWX8 675 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 DLG3Q92796 817 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 CHRDQ9H2X0 955 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 ANKZF1Q9H8Y5 726 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 LHX3Q9UBR4 397 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 GTF2A1LQ9UNN4 478 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 DYTNA2CJ06 578 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 EFCAB7A8K855 629 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 MATN2O00339 956 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 AURKAO14965 403 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 CCNA2P20248 432 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 MAGP20916 626 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 FBLP22087 321 aaKnown RBP8.84□□□□□ -0.99
HDAC9-229ENST00000622668 HNMTP50135 292 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 PNLIPRP1P54315 467 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 NRG1Q02297 640 aaPredicted RBP8.84□□□□□ -0.99
HDAC9-229ENST00000622668 DHRS13Q6UX07 377 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 RIPOR1Q6ZS17 1223 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 RGS9BPQ6ZS82 235 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 SHISA6Q6ZSJ9 500 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 RNF44Q7L0R7 432 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 ADIPOR2Q86V24 386 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 CYP4Z1Q86W10 505 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 FAM98AQ8NCA5 519 aaKnown RBP8.84□□□□□ -0.99
HDAC9-229ENST00000622668 ACVR1CQ8NER5 493 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 TNIP2Q8NFZ5 429 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 FBXO30Q8TB52 745 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 FAM174AQ8TBP5 190 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 PROX1Q92786 737 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 CDK15Q96Q40 435 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 DEPDC7Q96QD5 511 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 ZDHHC5Q9C0B5 715 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 ING2Q9H160 280 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 OR51B5Q9H339 312 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 A0A1W2PPC4 97 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 WASH4PA8MWX3 477 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 CASQ2O14958 399 aaPredicted RBP8.84□□□□□ -0.99
HDAC9-229ENST00000622668 KCNJ13O60928 360 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 PAPSS2O95340 614 aaPredicted RBP8.84□□□□□ -0.99
HDAC9-229ENST00000622668 THRAP10827 490 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 IL1RNP18510 177 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 AOC1P19801 751 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 NEK2P51955 445 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 COPAP53621 1224 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 LCP2Q13094 533 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 PTPRRQ15256 657 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 VPS26BQ4G0F5 336 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 FIGLAQ6QHK4 219 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 C16orf89Q6UX73 402 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 SLC29A4Q7RTT9 530 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 CLNKQ7Z7G1 428 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 LRRC34Q8IZ02 419 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 POMGNT2Q8NAT1 580 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 C5orf34Q96MH7 638 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 TRMOQ9BU70 441 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 ACTR5Q9H9F9 607 aaPredicted RBP8.84□□□□□ -0.99
HDAC9-229ENST00000622668 MARK1Q9P0L2 795 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 DKK3Q9UBP4 350 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 NME7Q9Y5B8 376 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms