RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 LCP2Q13094 533 aa17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 FASTKQ14296 549 aaKnown RBP17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 CYP2A13Q16696 494 aa17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 LAIR1Q6GTX8 287 aa17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 CAPN13Q6MZZ7 669 aaPredicted RBP17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 THOC6Q86W42 341 aaKnown RBP17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 CRLF3Q8IUI8 442 aa17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 C2orf73Q8N5S3 287 aaPredicted RBP17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 LCN9Q8WX39 176 aa17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 JPH3Q8WXH2 748 aaPredicted RBP17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 PRRX2Q99811 253 aa17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 ZBTB26Q9HCK0 441 aa17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 CCDC177Q9NQR7 707 aaPredicted RBP17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 DNAJC11Q9NVH1 559 aa17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 ICKQ9UPZ9 632 aa17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 SLC22A14Q9Y267 594 aa17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 GOLGA4Q13439 2230 aaKnown RBP17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 PPP6CO00743 305 aa17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 YKT6O15498 198 aa17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 CER1O95813 267 aa17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 MLYCDO95822 493 aa17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 EPB42P16452 691 aa17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 ARL1P40616 181 aaPredicted RBP17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 PIK3CGP48736 1102 aa17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 MAZP56270 477 aaKnown RBP17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 CORO7P57737 925 aa17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 HHEXQ03014 270 aa17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 GPR18Q14330 331 aa17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 PLCL1Q15111 1095 aa17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 CPLX4Q7Z7G2 160 aa17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 LRRC56Q8IYG6 542 aaPredicted RBP17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 PRSS33Q8NF86 280 aa17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 AGR3Q8TD06 166 aa17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 ZFPM2Q8WW38 1151 aa17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 ILKAPQ9H0C8 392 aaPredicted RBP17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 NOL11Q9H8H0 719 aaKnown RBP17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 IPPKQ9H8X2 491 aa17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 INTS7Q9NVH2 962 aaKnown RBP17.26■□□□□ 0.35
PTCHD3-202ENST00000622555 UBFD1O14562 309 aaKnown RBP17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 KHNYNO15037 678 aaKnown RBP17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 NOBOXO60393 691 aa17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 SNUPNO95149 360 aaKnown RBP17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 MPSTP25325 297 aa17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 CCT8P50990 548 aa17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 GALNT1Q10472 559 aaPredicted RBP17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 TCF15Q12870 199 aa17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 PRKAA1Q13131 559 aa17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 GKAP1Q5VSY0 366 aaPredicted RBP17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 SUSD1Q6UWL2 747 aa17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 CUZD1Q86UP6 607 aa17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 GATAD2AQ86YP4 633 aa17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 KLHDC8AQ8IYD2 350 aa17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 AVL9Q8NBF6 648 aa17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 OR2I1PQ8NGU4 316 aa17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 OR2L8Q8NGY9 312 aa17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 SMPDL3AQ92484 453 aa17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 ATP6V1E2Q96A05 226 aa17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 GTPBP2Q9BX10 602 aaKnown RBP17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 NSRP1Q9H0G5 558 aaKnown RBP17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 STN1Q9H668 368 aaKnown RBP17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 MID1IP1Q9NPA3 183 aa17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 RAP2CQ9Y3L5 183 aa17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 ARID1BQ8NFD5 2236 aaPredicted RBP17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 WDFY4Q6ZS81 3184 aa17.25■□□□□ 0.35
PTCHD3-202ENST00000622555 GPR179Q6PRD1 2367 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 KATNA1O75449 491 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 CCND1P24385 295 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 SHMT2P34897 504 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 BIRC2Q13490 618 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 C6orf132Q5T0Z8 1188 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 THEMIS2Q5TEJ8 643 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 TCEAL6Q6IPX3 200 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 OGFOD3Q6PK18 319 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 ARL14Q8N4G2 192 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 ZNF781Q8N8C0 355 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 LINC01555Q8NAE3 123 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 OR4E2Q8NGC2 313 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 TCEAL3Q969E4 200 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 SH3KBP1Q96B97 665 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 SGPP1Q9BX95 441 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 SRMSQ9H3Y6 488 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 MARCOQ9UEW3 520 aaPredicted RBP17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 OR7A17O14581 309 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 GIPC1O14908 333 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 OTCP00480 354 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 KITP10721 976 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 ENGP17813 658 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 CCNG1P51959 295 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 SH3BP2P78314 561 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 CDC16Q13042 620 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 SH2D4BQ5SQS7 431 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 GPRIN3Q6ZVF9 776 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 KANSL1Q7Z3B3 1105 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 AMIGO1Q86WK6 493 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 RBM12BQ8IXT5 1001 aaKnown RBP17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 CACNA2D3Q8IZS8 1091 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 KYQ8NBH2 561 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 OR52B6Q8NGF0 335 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 SAP25Q8TEE9 199 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 AGAP11Q8TF27 550 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms