RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 FKBP10Q96AY3 582 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 HSPBAP1Q96EW2 488 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 SCRN2Q96FV2 425 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 COPS8Q99627 209 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 TBCDQ9BTW9 1192 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 CFHR5Q9BXR6 569 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 CPEB1Q9BZB8 566 aaKnown RBP9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 TRIT1Q9H3H1 467 aaKnown RBP9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 PARVBQ9HBI1 364 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 SLC6A13Q9NSD5 602 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 C3orf18Q9UK00 162 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 UTS2RQ9UKP6 389 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 PPT2Q9UMR5 302 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 ERVW-1Q9UQF0 538 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 PCDHGB1Q9Y5G3 927 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 INSL5Q9Y5Q6 135 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 HSPE1-MOB4S4R3N1 261 aa9.37□□□□□ -0.91
IGHV3-54-201ENST00000622166 A0A1W2PQ67 120 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 CARNS1A5YM72 827 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 TMX2-CTNND1H3BSU7 103 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 GFYI3L273 518 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 SLC1A7O00341 560 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 PRRG1O14668 218 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 KPNA5O15131 536 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 B4GAT1O43505 415 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 NOBOXO60393 691 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 MRPS14O60783 128 aaKnown RBP9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 UGT2B11O75310 529 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 CCNDBP1O95273 360 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 BCL10O95999 233 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 GNRH1P01148 92 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 C1SP09871 688 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 SRCP12931 536 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 AMD1P17707 334 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 SDC1P18827 310 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 MAP4P27816 1152 aaKnown RBP9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 GKP32189 559 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 PIGAP37287 484 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 TPD52P55327 224 aaPredicted RBP9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 AP1S2P56377 157 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZXDBP98169 803 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 PCDH1Q08174 1060 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 CSTF3Q12996 717 aaKnown RBP9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 TMED1Q13445 227 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 LAPTM5Q13571 262 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 MEP1AQ16819 746 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 DUOXA1Q1HG43 343 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 DPY19L1Q2PZI1 675 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZXDCQ2QGD7 858 aaPredicted RBP9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 CPZQ66K79 652 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 ANKRD34AQ69YU3 496 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 CES5AQ6NT32 575 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 ERICH5Q6P6B1 374 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 DNAJC14Q6Y2X3 702 aaPredicted RBP9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 MBOAT1Q6ZNC8 495 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 LINC00299Q6ZSB3 139 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 GPR155Q7Z3F1 870 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 ZNF554Q86TJ5 538 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 RBM23Q86U06 439 aaKnown RBP9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 SERPINA11Q86U17 422 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 ANKRD13BQ86YJ7 626 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 GPR65Q8IYL9 337 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 HS3ST5Q8IZT8 346 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 SETD9Q8NE22 299 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 CLHC1Q8NHS4 586 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 CD99L2Q8TCZ2 262 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 RAET1EQ8TD07 263 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 ASB11Q8WXH4 323 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 NCLNQ969V3 563 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 FBXL8Q96CD0 374 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 PLEKHA8Q96JA3 519 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 CSF3RQ99062 836 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 INPP5KQ9BT40 448 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 ADNPQ9H2P0 1102 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 SUV39H2Q9H5I1 410 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 TM9SF3Q9HD45 589 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 MRPL17Q9NRX2 175 aaKnown RBP9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 DNAJC11Q9NVH1 559 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 DNAAF2Q9NVR5 837 aaKnown RBP9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 THG1LQ9NWX6 298 aaKnown RBP9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 ARL15Q9NXU5 204 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 GPRC5BQ9NZH0 403 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 INTS6Q9UL03 887 aaKnown RBP9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 SAMD4AQ9UPU9 718 aaKnown RBP9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 B3GNT3Q9Y2A9 372 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 ORC6Q9Y5N6 252 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 SNX5Q9Y5X3 404 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 AP1M2Q9Y6Q5 423 aa9.36□□□□□ -0.91
IGHV3-54-201ENST00000622166 hCG_2014768A0A024R1R8 64 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 EVPLLA8MZ36 301 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 E9PQ18 207 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 BCKDKO14874 412 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 HS6ST1O60243 411 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 UGDHO60701 494 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 DPM1O60762 260 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 PRAMEF4O60810 478 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 CBFA2T3O75081 653 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 CLPXO76031 633 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 AP2A2O94973 939 aa9.35□□□□□ -0.91
IGHV3-54-201ENST00000622166 BMP1P13497 986 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms