RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 ACPTQ9BZG2 426 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 MAGEE1Q9HCI5 957 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 USE1Q9NZ43 259 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 VPS9D1Q9Y2B5 631 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 NLRC5Q86WI3 1866 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 TDRD15B5MCY1 1934 aaKnown RBP15.38■□□□□ 0.05
NPHP4-211ENST00000622020 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-211ENST00000622020 MZF1P28698 734 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-211ENST00000622020 SLC35A2P78381 396 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 CREMQ03060 361 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 MGAT3Q09327 533 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 ZNF177Q13360 481 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-211ENST00000622020 TOP3AQ13472 1001 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-211ENST00000622020 HIST2H2ACQ16777 129 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-211ENST00000622020 ZNF621Q6ZSS3 439 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 HORMAD1Q86X24 394 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 HIPK1Q86Z02 1210 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 AADATQ8N5Z0 425 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 RDH12Q96NR8 316 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 FAM126AQ9BYI3 521 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-211ENST00000622020 MAGEH1Q9H213 219 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 CLMPQ9H6B4 373 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 SCHIP1Q9P0W5 487 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-211ENST00000622020 TPRKBQ9Y3C4 175 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 PATJQ8NI35 1801 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 A6NL46 340 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 M0R129 80 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 RFXANKO14593 260 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 SLC22A1O15245 554 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 DNTTP04053 509 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 CCDC159P0C7I6 412 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 AKR1A1P14550 325 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 CR2P20023 1033 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 KRT20P35900 424 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 MRPL19P49406 292 aaKnown RBP15.37■□□□□ 0.05
NPHP4-211ENST00000622020 ARHGDIAP52565 204 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 RPS14P62263 151 aaKnown RBP15.37■□□□□ 0.05
NPHP4-211ENST00000622020 DDX39BQ13838 428 aaKnown RBP15.37■□□□□ 0.05
NPHP4-211ENST00000622020 PRSS36Q5K4E3 855 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 PDE12Q6L8Q7 609 aaKnown RBP15.37■□□□□ 0.05
NPHP4-211ENST00000622020 SYTL1Q8IYJ3 562 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 TTC30BQ8N4P2 665 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 POC5Q8NA72 575 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 SIRT5Q9NXA8 310 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 PTPRDP23468 1912 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 EFCAB9A8MZ26 197 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 MANBAO00462 879 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 RGS10O43665 173 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 OAZ2O95190 189 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 PABPC1P11940 636 aaKnown RBP15.37■□□□□ 0.05
NPHP4-211ENST00000622020 EPB42P16452 691 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 SERPINB10P48595 397 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 DGKEP52429 567 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 ARF5P84085 180 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 TAF1CQ15572 869 aaPredicted RBP15.37■□□□□ 0.05
NPHP4-211ENST00000622020 CLIP4Q8N3C7 705 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 CARNMT1Q8N4J0 409 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 FAM83FQ8NEG4 500 aaPredicted RBP15.37■□□□□ 0.05
NPHP4-211ENST00000622020 DYNC2LI1Q8TCX1 351 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 REXO5Q96IC2 774 aaKnown RBP15.37■□□□□ 0.05
NPHP4-211ENST00000622020 SH3GL1Q99961 368 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 CD244Q9BZW8 370 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 ACOT13Q9NPJ3 140 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 KRT84Q9NSB2 600 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 PPT2Q9UMR5 302 aa15.37■□□□□ 0.05
NPHP4-211ENST00000622020 PSMD11O00231 422 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 KDELR3O43731 214 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 CLDN7O95471 211 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 NTRK1P04629 796 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 ASGR1P07306 291 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 HSMCR30P0CW71 290 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 TNFRSF1BP20333 461 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 SERPINB1P30740 379 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 NR4A2P43354 598 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 SF3B4Q15427 424 aaKnown RBP eCLIP15.36■□□□□ 0.055e-8■■■■□ 21.4
NPHP4-211ENST00000622020 USP39Q53GS9 565 aaKnown RBP15.36■□□□□ 0.05
NPHP4-211ENST00000622020 OR2T5Q6IEZ7 315 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 PRSS55Q6UWB4 352 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-211ENST00000622020 CCDC71Q8IV32 467 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-211ENST00000622020 OR2T29Q8NH02 315 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 OR52J3Q8NH60 311 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 ZNF641Q96N77 438 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-211ENST00000622020 KCNC2Q96PR1 638 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 ZNF300Q96RE9 604 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-211ENST00000622020 P2RY12Q9H244 342 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 DSN1Q9H410 356 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 SERHLQ9NQF3 203 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 AASDHPPTQ9NRN7 309 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 TTC34A8MYJ7 566 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 IFRD1O00458 451 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-211ENST00000622020 SLC16A6O15403 523 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 RYKP34925 604 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 LIPAP38571 399 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 PCYT1AP49585 367 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 RHOAP61586 193 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 SELENBP1Q13228 472 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 CYP27C1Q4G0S4 372 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 TMEM132CQ8N3T6 1108 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 S100ZQ8WXG8 99 aa15.36■□□□□ 0.05
NPHP4-211ENST00000622020 APIPQ96GX9 242 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms