RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 TFF2Q03403 129 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 PRKCQQ04759 706 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 GRIK2Q13002 908 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 PYCR3Q53H96 274 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 RGL4Q8IZJ4 473 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 GUCD1Q96NT3 240 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 BRINP2Q9C0B6 783 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 WDR41Q9HAD4 459 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 NOP53Q9NZM5 478 aaKnown RBP20.81■□□□□ 0.92
SPAST-204ENST00000621856 USP36Q9P275 1121 aaKnown RBP20.81■□□□□ 0.92
SPAST-204ENST00000621856 PLAGL1Q9UM63 463 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 KCNK6Q9Y257 313 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 CA5BQ9Y2D0 317 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 DYRK1BQ9Y463 629 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 POLR3HQ9Y535 204 aaPredicted RBP20.81■□□□□ 0.92
SPAST-204ENST00000621856 CFAP20Q9Y6A4 193 aaKnown RBP20.81■□□□□ 0.92
SPAST-204ENST00000621856 MRASO14807 208 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 NRP2O60462 931 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 HOXC4P09017 264 aaPredicted RBP20.81■□□□□ 0.92
SPAST-204ENST00000621856 KIAA1024LP59773 190 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 MAD2L1Q13257 205 aaPredicted RBP20.81■□□□□ 0.92
SPAST-204ENST00000621856 DOC2AQ14183 400 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 KPNB1Q14974 876 aaKnown RBP20.81■□□□□ 0.92
SPAST-204ENST00000621856 PUS10Q3MIT2 529 aaKnown RBP20.81■□□□□ 0.92
SPAST-204ENST00000621856 PACS2Q86VP3 889 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 PGAM4Q8N0Y7 254 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 LRTM1Q9HBL6 345 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 GPRC5BQ9NZH0 403 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 SLC7A8Q9UHI5 535 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 MRPS17Q9Y2R5 130 aaKnown RBP20.81■□□□□ 0.92
SPAST-204ENST00000621856 KCNE2Q9Y6J6 123 aa20.81■□□□□ 0.92
SPAST-204ENST00000621856 BBIP1A8MTZ0 92 aa20.8■□□□□ 0.92
SPAST-204ENST00000621856 C9JVG2 144 aa20.8■□□□□ 0.92
SPAST-204ENST00000621856 FBP2O00757 339 aa20.8■□□□□ 0.92
SPAST-204ENST00000621856 CFLARO15519 480 aa20.8■□□□□ 0.92
SPAST-204ENST00000621856 LATO43561 262 aa20.8■□□□□ 0.92
SPAST-204ENST00000621856 PDE5AO76074 875 aa20.8■□□□□ 0.92
SPAST-204ENST00000621856 AKT2P31751 481 aa20.8■□□□□ 0.92
SPAST-204ENST00000621856 HNRNPH1P31943 449 aaKnown RBP20.8■□□□□ 0.92
SPAST-204ENST00000621856 NEK2P51955 445 aa20.8■□□□□ 0.92
SPAST-204ENST00000621856 PRKG2Q13237 762 aa20.8■□□□□ 0.92
SPAST-204ENST00000621856 NFATC4Q14934 902 aa20.8■□□□□ 0.92
SPAST-204ENST00000621856 UBXN2BQ14CS0 331 aa20.8■□□□□ 0.92
SPAST-204ENST00000621856 RFTN2Q52LD8 501 aaPredicted RBP20.8■□□□□ 0.92
SPAST-204ENST00000621856 IL23RQ5VWK5 629 aa20.8■□□□□ 0.92
SPAST-204ENST00000621856 FRG2Q64ET8 278 aa20.8■□□□□ 0.92
SPAST-204ENST00000621856 ANO7Q6IWH7 933 aa20.8■□□□□ 0.92
SPAST-204ENST00000621856 SYT13Q7L8C5 426 aa20.8■□□□□ 0.92
SPAST-204ENST00000621856 NET1Q7Z628 596 aaPredicted RBP20.8■□□□□ 0.92
SPAST-204ENST00000621856 SYNPOQ8N3V7 929 aa20.8■□□□□ 0.92
SPAST-204ENST00000621856 FRG2BQ96QU4 278 aa20.8■□□□□ 0.92
SPAST-204ENST00000621856 TRIT1Q9H3H1 467 aaKnown RBP20.8■□□□□ 0.92
SPAST-204ENST00000621856 FGF22Q9HCT0 170 aa20.8■□□□□ 0.92
SPAST-204ENST00000621856 ZIM2Q9NZV7 527 aa20.8■□□□□ 0.92
SPAST-204ENST00000621856 PRPF19Q9UMS4 504 aaKnown RBP20.8■□□□□ 0.92
SPAST-204ENST00000621856 EIF3LQ9Y262 564 aaKnown RBP20.8■□□□□ 0.92
SPAST-204ENST00000621856 PLEKHM1Q9Y4G2 1056 aa20.8■□□□□ 0.92
SPAST-204ENST00000621856 CHURC1-FNTBB4DL54 471 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 KCNJ13O60928 360 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 SEC22BO75396 215 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 SLC22A3O75751 556 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 GNAZP19086 355 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 HNF4AP41235 474 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 KCNK10P57789 538 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 UFM1P61960 85 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 SMU1Q2TAY7 513 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 HABP4Q5JVS0 413 aaKnown RBP20.79■□□□□ 0.92
SPAST-204ENST00000621856 GRHL2Q6ISB3 625 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 ENPP7Q6UWV6 458 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 BNC2Q6ZN30 1099 aaPredicted RBP20.79■□□□□ 0.92
SPAST-204ENST00000621856 EFCAB3Q8N7B9 438 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 LMNTD1Q8N9Z9 388 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 OR5K2Q8NHB8 316 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 WDR60Q8WVS4 1066 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 SLC45A3Q96JT2 553 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 IL17FQ96PD4 163 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 SGPP1Q9BX95 441 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 ACPTQ9BZG2 426 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 CARS2Q9HA77 564 aaKnown RBP20.79■□□□□ 0.92
SPAST-204ENST00000621856 PRM3Q9NNZ6 103 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 CCDC177Q9NQR7 707 aaPredicted RBP20.79■□□□□ 0.92
SPAST-204ENST00000621856 C1orf109Q9NX04 203 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 FBXL21Q9UKT6 434 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 CYP8B1Q9UNU6 501 aa20.79■□□□□ 0.92
SPAST-204ENST00000621856 PRSS38A1L453 326 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 H0Y8X5 98 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 ANGPT2O15123 496 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 SCAMP1O15126 338 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 ENTPD5O75356 428 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 CD22P20273 847 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 THEMIS2Q5TEJ8 643 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 C1orf146Q5VVC0 180 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 CAPRIN2Q6IMN6 1127 aaKnown RBP20.78■□□□□ 0.92
SPAST-204ENST00000621856 CYP20A1Q6UW02 462 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 SUSD1Q6UWL2 747 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 TMPRSS11BQ86T26 416 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 ZFAND4Q86XD8 727 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 PCYOX1LQ8NBM8 494 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 TSTD1Q8NFU3 115 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 C12orf66Q96MD2 445 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms