RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ADGRD1Q6QNK2 874 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 SUSD1Q6UWL2 747 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 CENPLQ8N0S6 344 aaPredicted RBP13.82□□□□□ -0.2
CBWD3-217ENST00000621474 CARFQ8N187 725 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 OR2A1Q8NGT9 310 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 PTERQ96BW5 349 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 TRAPPC9Q96Q05 1148 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 KLHL25Q9H0H3 589 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 APMAPQ9HDC9 416 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 STOX2Q9P2F5 926 aaPredicted RBP13.82□□□□□ -0.2
CBWD3-217ENST00000621474 DKK4Q9UBT3 224 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 BTRCQ9Y297 605 aa13.82□□□□□ -0.2
CBWD3-217ENST00000621474 SLC9B1P1A6NJY1 282 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 ISM1B1AKI9 464 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 C9orf172C9J069 976 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 TNFSF15O95150 251 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 ZBTB11O95625 1053 aaPredicted RBP13.81□□□□□ -0.2
CBWD3-217ENST00000621474 SYF2O95926 243 aaKnown RBP13.81□□□□□ -0.2
CBWD3-217ENST00000621474 C2P06681 752 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 CYP2A7P20853 494 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 CDH3P22223 829 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 MAP4P27816 1152 aaKnown RBP13.81□□□□□ -0.2
CBWD3-217ENST00000621474 HSD17B3P37058 310 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 MSH2P43246 934 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 PNLIPRP1P54315 467 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 CSHL1Q14406 222 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 SLC5A12Q1EHB4 618 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 FAM129CQ86XR2 697 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 KMT5CQ86Y97 462 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 D2HGDHQ8N465 521 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 MCOLN3Q8TDD5 553 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 UBLCP1Q8WVY7 318 aaPredicted RBP13.81□□□□□ -0.2
CBWD3-217ENST00000621474 CAVIN3Q969G5 261 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 IGSF5Q9NSI5 407 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 FETUBQ9UGM5 382 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 NOVA2Q9UNW9 492 aaKnown RBP13.81□□□□□ -0.2
CBWD3-217ENST00000621474 AK5Q9Y6K8 562 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 LOC400499M0QZD8 3231 aa13.81□□□□□ -0.2
CBWD3-217ENST00000621474 A0A0J9YY10 115 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 B4E171 279 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 HCRTR1O43613 425 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 NRP2O60462 931 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 ENO2P09104 434 aaPredicted RBP13.8□□□□□ -0.2
CBWD3-217ENST00000621474 JMJD7P0C870 316 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 FOLR1P15328 257 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 CRABP2P29373 138 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 TSPAN7P41732 249 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 KCNC1P48547 511 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 HSD11B2P80365 405 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 MC2RQ01718 297 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 OR4D1Q15615 310 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 KIAA1614Q5VZ46 1190 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 EMBQ6PCB8 327 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 CLEC14AQ86T13 490 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 MZB1Q8WU39 189 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 CCDC138Q96M89 665 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 FAM60AQ9NP50 221 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 UTP6Q9NYH9 597 aaKnown RBP13.8□□□□□ -0.2
CBWD3-217ENST00000621474 EURLQ9NYK6 297 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 FOXJ2Q9P0K8 574 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 CTNNAL1Q9UBT7 734 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 LNPEPQ9UIQ6 1025 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 KLHL20Q9Y2M5 609 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 FER1L5A0AVI2 2057 aa13.8□□□□□ -0.2
CBWD3-217ENST00000621474 IGKV1-8A0A0C4DH67 115 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 TRIM49D1C9J1S8 452 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 EBLN1P0CF75 366 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 MAGP20916 626 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 OAS2P29728 719 aaKnown RBP13.79□□□□□ -0.2
CBWD3-217ENST00000621474 GABRA4P48169 554 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 SERPINB9P50453 376 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 MAPK10P53779 464 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 AP1S2P56377 157 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 TBC1D25Q3MII6 688 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 RAPH1Q70E73 1250 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 ISCA2Q86U28 154 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 SYTL1Q8IYJ3 562 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 RAB42Q8N4Z0 105 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 OR2L3Q8NG85 312 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 KCTD4Q8WVF5 259 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 SMPDL3AQ92484 453 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 USP7Q93009 1102 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 SLC22A18Q96BI1 424 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 NXNL1Q96CM4 212 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 GPR78Q96P69 363 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 CTRCQ99895 268 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 FBXO8Q9NRD0 319 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 AKAP7Q9P0M2 348 aaPredicted RBP13.79□□□□□ -0.2
CBWD3-217ENST00000621474 OARD1Q9Y530 152 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 B3GALT1Q9Y5Z6 326 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 IKBKGQ9Y6K9 419 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 ZZEF1O43149 2961 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 URB1O60287 2271 aaKnown RBP13.79□□□□□ -0.2
CBWD3-217ENST00000621474 A0A096LPK6 155 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 TAF4O00268 1085 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 TLX3O43711 291 aaPredicted RBP13.79□□□□□ -0.2
CBWD3-217ENST00000621474 KRT38O76015 456 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 GUCA1CO95843 209 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 TYK2P29597 1187 aa13.79□□□□□ -0.2
CBWD3-217ENST00000621474 SLC5A2P31639 672 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms