RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 RABEP2Q9H5N1 569 aa7.56□□□□□ -1.2
CLK1-215ENST00000621181 ASB8Q9H765 288 aa7.56□□□□□ -1.2
CLK1-215ENST00000621181 ZBTB20Q9HC78 741 aaPredicted RBP7.56□□□□□ -1.2
CLK1-215ENST00000621181 ATP13A2Q9NQ11 1180 aa7.56□□□□□ -1.2
CLK1-215ENST00000621181 TXLNGQ9NUQ3 528 aa7.56□□□□□ -1.2
CLK1-215ENST00000621181 IRAK4Q9NWZ3 460 aa7.56□□□□□ -1.2
CLK1-215ENST00000621181 SAE1Q9UBE0 346 aaPredicted RBP7.56□□□□□ -1.2
CLK1-215ENST00000621181 CRLS1Q9UJA2 301 aa7.56□□□□□ -1.2
CLK1-215ENST00000621181 ENTPD4Q9Y227 616 aa7.56□□□□□ -1.2
CLK1-215ENST00000621181 OSGIN2Q9Y236 505 aa7.56□□□□□ -1.2
CLK1-215ENST00000621181 NTNG1Q9Y2I2 539 aa7.56□□□□□ -1.2
CLK1-215ENST00000621181 ARL5AQ9Y689 179 aa7.56□□□□□ -1.2
CLK1-215ENST00000621181 AP1M2Q9Y6Q5 423 aa7.56□□□□□ -1.2
CLK1-215ENST00000621181 F8P00451 2351 aa7.56□□□□□ -1.2
CLK1-215ENST00000621181 MYO7BQ6PIF6 2116 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 C2orf81A6NN90 581 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 CFAP99D6REC4 459 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 MASP2O00187 686 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 TP73O15350 636 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 ZSCAN9O15535 394 aaPredicted RBP7.55□□□□□ -1.2
CLK1-215ENST00000621181 ZG16O60844 167 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 PRF1P14222 555 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 POU3F2P20265 443 aaPredicted RBP7.55□□□□□ -1.2
CLK1-215ENST00000621181 CD68P34810 354 aaPredicted RBP7.55□□□□□ -1.2
CLK1-215ENST00000621181 NR2C2P49116 596 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 PRLHRP49683 370 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 DR1Q01658 176 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 CDC16Q13042 620 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 AIMP2Q13155 320 aaKnown RBP7.55□□□□□ -1.2
CLK1-215ENST00000621181 PRKG2Q13237 762 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 PTPRCAPQ14761 206 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 PRKD1Q15139 912 aaPredicted RBP7.55□□□□□ -1.2
CLK1-215ENST00000621181 DEFB110Q30KQ9 67 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 CRB2Q5IJ48 1285 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 IRAK1BP1Q5VVH5 260 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 ZNF449Q6P9G9 518 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 SPESP1Q6UW49 350 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 ZC3H18Q86VM9 953 aaKnown RBP7.55□□□□□ -1.2
CLK1-215ENST00000621181 KCNMB4Q86W47 210 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 ARFGAP2Q8N6H7 521 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 C19orf47Q8N9M1 422 aaKnown RBP7.55□□□□□ -1.2
CLK1-215ENST00000621181 OR4K2Q8NGD2 314 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 OR52E1Q8NGJ3 308 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 PROKR1Q8TCW9 393 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 PPP4R1Q8TF05 950 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 PTERQ96BW5 349 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 OXNAD1Q96HP4 312 aaPredicted RBP7.55□□□□□ -1.2
CLK1-215ENST00000621181 CNDP1Q96KN2 507 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 LINC00615Q96LM1 132 aaPredicted RBP7.55□□□□□ -1.2
CLK1-215ENST00000621181 GBP5Q96PP8 586 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 NRTNQ99748 197 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 HGH1Q9BTY7 390 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 UNKQ9C0B0 810 aaKnown RBP7.55□□□□□ -1.2
CLK1-215ENST00000621181 RAB17Q9H0T7 212 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 DPH5Q9H2P9 285 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 XKR8Q9H6D3 395 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 VPS37BQ9H9H4 285 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 ACTR10Q9NZ32 417 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 DHCR7Q9UBM7 475 aaKnown RBP7.55□□□□□ -1.2
CLK1-215ENST00000621181 NOVA2Q9UNW9 492 aaKnown RBP7.55□□□□□ -1.2
CLK1-215ENST00000621181 CDYLQ9Y232 598 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 UTP11Q9Y3A2 253 aaKnown RBP7.55□□□□□ -1.2
CLK1-215ENST00000621181 CSAG2Q9Y5P2 127 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 DOCK10Q96BY6 2186 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 PRSS44E7EML9 344 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 CBSLP0DN79 551 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 ATP1B2P14415 290 aaPredicted RBP7.55□□□□□ -1.2
CLK1-215ENST00000621181 COMTP21964 271 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 CBSP35520 551 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 RPL21P46778 160 aaKnown RBP7.55□□□□□ -1.2
CLK1-215ENST00000621181 EIF3BP55884 814 aaKnown RBP7.55□□□□□ -1.2
CLK1-215ENST00000621181 RIPPLY3P57055 190 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 FOXL2P58012 376 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 PPP2R2AP63151 447 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 WASHC5Q12768 1159 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 MPP3Q13368 585 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 TAF1AQ15573 450 aaPredicted RBP7.55□□□□□ -1.2
CLK1-215ENST00000621181 ZRSR2Q15696 482 aaKnown RBP7.55□□□□□ -1.2
CLK1-215ENST00000621181 HIF1AQ16665 826 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 NKAIN1Q4KMZ8 207 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 KAZNQ674X7 775 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 ZNF655Q8N720 491 aaPredicted RBP7.55□□□□□ -1.2
CLK1-215ENST00000621181 PHC3Q8NDX5 983 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 DNAJB14Q8TBM8 379 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 GRHL3Q8TE85 626 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 P3H4Q92791 437 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 SLCO2A1Q92959 643 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.55□□□□□ -1.26e-6■□□□□ 9.8
CLK1-215ENST00000621181 FCRL5Q96RD9 977 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 FMO2Q99518 471 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 VAT1Q99536 393 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 TFB2MQ9H5Q4 396 aaKnown RBP7.55□□□□□ -1.2
CLK1-215ENST00000621181 RUBCNLQ9H714 662 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 FAM60AQ9NP50 221 aa7.55□□□□□ -1.2
CLK1-215ENST00000621181 PKDREJQ9NTG1 2253 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 PCM1Q15154 2024 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 C17orf113A0A1B0GUU1 675 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 TCRBV7S2A1N4TA0A589 114 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 GMNCA6NCL1 334 aa7.54□□□□□ -1.2
CLK1-215ENST00000621181 SGTAO43765 313 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms