RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 LGI4Q8N135 537 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 ZBTB2Q8N680 514 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 MAELQ96JY0 434 aaKnown RBP20.07■□□□□ 0.8
PCSK6-217ENST00000618548 C8orf48Q96LL4 319 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 TSPAN18Q96SJ8 248 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 MROQ9BYG7 248 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 PTGFRNQ9P2B2 879 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 ANGPT4Q9Y264 503 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 MAP4K5Q9Y4K4 846 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 LYVE1Q9Y5Y7 322 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 SMCHD1A6NHR9 2005 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 FADS2P1A8MWK0 482 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 NUAK1O60285 661 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 TACR2P21452 398 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 PPP2R1BP30154 601 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 IDUAP35475 653 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 NFKB2Q00653 900 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 SCAPQ12770 1279 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 RCAN2Q14206 197 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 DDI2Q5TDH0 399 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 MZT2AQ6P582 158 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 USP30Q70CQ3 517 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 PELI3Q8N2H9 469 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 VANGL1Q8TAA9 524 aaPredicted RBP20.07■□□□□ 0.8
PCSK6-217ENST00000618548 ATP13A3Q9H7F0 1226 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 ZFYVE1Q9HBF4 777 aa20.07■□□□□ 0.8
PCSK6-217ENST00000618548 WDR6Q9NNW5 1121 aaKnown RBP20.07■□□□□ 0.8
PCSK6-217ENST00000618548 ADAMTSL3P82987 1691 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 OR1I1O60431 355 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 ADAM23O75077 832 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 USP2O75604 605 aaPredicted RBP20.06■□□□□ 0.8
PCSK6-217ENST00000618548 CKMP06732 381 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 PAICSP22234 425 aaKnown RBP20.06■□□□□ 0.8
PCSK6-217ENST00000618548 CAMK2GQ13555 558 aaPredicted RBP20.06■□□□□ 0.8
PCSK6-217ENST00000618548 GANABQ14697 944 aaKnown RBP20.06■□□□□ 0.8
PCSK6-217ENST00000618548 TAF1AQ15573 450 aaPredicted RBP20.06■□□□□ 0.8
PCSK6-217ENST00000618548 CERS6Q6ZMG9 384 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 MMAAQ8IVH4 418 aaKnown RBP20.06■□□□□ 0.8
PCSK6-217ENST00000618548 ZNF675Q8TD23 568 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 IMP4Q96G21 291 aaKnown RBP20.06■□□□□ 0.8
PCSK6-217ENST00000618548 COL21A1Q96P44 957 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 MTERF1Q99551 399 aaKnown RBP20.06■□□□□ 0.8
PCSK6-217ENST00000618548 OR2B2Q9GZK3 357 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 SIAEQ9HAT2 523 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 TM9SF3Q9HD45 589 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 PRKAB1Q9Y478 270 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 PRRC2BQ5JSZ5 2229 aaKnown RBP20.06■□□□□ 0.8
PCSK6-217ENST00000618548 ST3GAL4Q11206 333 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 CHIT1Q13231 466 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 NLNQ9BYT8 704 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 MAF1Q9H063 256 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 VAPAQ9P0L0 249 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 GPR45Q9Y5Y3 372 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 BMP4P12644 408 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 CACNG1Q06432 222 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 IQCCQ4KMZ1 466 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 TICAM1Q8IUC6 712 aa20.06■□□□□ 0.8
PCSK6-217ENST00000618548 UPK1BO75841 260 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 ALPLP05186 524 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 GADD45AP24522 165 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 RCVRNP35243 200 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 FEN1P39748 380 aaKnown RBP20.05■□□□□ 0.8
PCSK6-217ENST00000618548 MAGEA12P43365 314 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 MRPS6P82932 125 aaKnown RBP20.05■□□□□ 0.8
PCSK6-217ENST00000618548 PKDCCQ504Y2 493 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 ALFQ53S48 1182 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 TBPL2Q6SJ96 375 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 DCP2Q8IU60 420 aaKnown RBP20.05■□□□□ 0.8
PCSK6-217ENST00000618548 OR6Q1Q8NGQ2 317 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 ZNF224Q9NZL3 707 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 RBPJLQ9UBG7 517 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 FAM172BPA6NC97 362 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 FAM47E-STBD1D6RA91 191 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 C1QAP02745 245 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 ANXA8P13928 327 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 SMPD1P17405 629 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 C4BPBP20851 252 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 PRKAG1P54619 331 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 ABATP80404 500 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 C2orf69Q8N8R5 385 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 ISL2Q96A47 359 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 HSPB11Q9Y547 144 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 OAS3Q9Y6K5 1087 aaKnown RBP20.05■□□□□ 0.8
PCSK6-217ENST00000618548 TMEM221A6NGB7 291 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 ARL5CA6NH57 179 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 PCP4L1A6NKN8 68 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 H0YC42 278 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 STSP08842 583 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 ANXA4P09525 319 aaPredicted RBP20.05■□□□□ 0.8
PCSK6-217ENST00000618548 SF3B4Q15427 424 aaKnown RBP eCLIP20.05■□□□□ 0.82e-7■■■■□ 22.4
PCSK6-217ENST00000618548 FBXO43Q4G163 708 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 CAMKK2Q96RR4 588 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 ZNF382Q96SR6 550 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 ZBTB20Q9HC78 741 aaPredicted RBP20.05■□□□□ 0.8
PCSK6-217ENST00000618548 IFT52Q9Y366 437 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 NUP205Q92621 2012 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 SSNA1O43805 119 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 ABRAXAS2Q15018 415 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 MFSD14CQ5VZR4 134 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms