RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 DNASE1L3Q13609 305 aa19.89■□□□□ 0.77
NEK3-208ENST00000618534 CLCA4Q14CN2 919 aa19.89■□□□□ 0.77
NEK3-208ENST00000618534 OR6Q1Q8NGQ2 317 aa19.89■□□□□ 0.77
NEK3-208ENST00000618534 DYNC2LI1Q8TCX1 351 aa19.89■□□□□ 0.77
NEK3-208ENST00000618534 TRIB2Q92519 343 aa19.89■□□□□ 0.77
NEK3-208ENST00000618534 MYOCQ99972 504 aa19.89■□□□□ 0.77
NEK3-208ENST00000618534 GPRC5BQ9NZH0 403 aa19.89■□□□□ 0.77
NEK3-208ENST00000618534 PPT2Q9UMR5 302 aa19.89■□□□□ 0.77
NEK3-208ENST00000618534 AQP9O43315 295 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 PDYNP01213 254 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 TGM1P22735 817 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 CLDN8P56748 225 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 ABHD18Q0P651 414 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 PGS1Q32NB8 556 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 RTP2Q5QGT7 225 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 LINC00299Q6ZSB3 139 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 CHST9Q7L1S5 443 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 GALNT10Q86SR1 603 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 HCSTQ9UBK5 93 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 GMPPBQ9Y5P6 360 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 BRCA2P51587 3418 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 COCHO43405 550 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 STC2O76061 302 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 PARNO95453 639 aaKnown RBP19.88■□□□□ 0.77
NEK3-208ENST00000618534 TACR1P25103 407 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 MZF1P28698 734 aaPredicted RBP19.88■□□□□ 0.77
NEK3-208ENST00000618534 RHOAP61586 193 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 KEAP1Q14145 624 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 ARHGEF7Q14155 803 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 SYT6Q5T7P8 510 aaPredicted RBP19.88■□□□□ 0.77
NEK3-208ENST00000618534 OR2T5Q6IEZ7 315 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 DOK6Q6PKX4 331 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 SNX20Q7Z614 316 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 OR6K2Q8NGY2 324 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 OR2T29Q8NH02 315 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 DNAJB8Q8NHS0 232 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 WBP2Q969T9 261 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 LATS2Q9NRM7 1088 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 SCN3BQ9NY72 215 aa19.88■□□□□ 0.77
NEK3-208ENST00000618534 hCG_2039718K7EN88 272 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 CNOT3O75175 753 aaKnown RBP19.87■□□□□ 0.77
NEK3-208ENST00000618534 SERPINB10P48595 397 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 TMED10P49755 219 aaKnown RBP19.87■□□□□ 0.77
NEK3-208ENST00000618534 FPGSQ05932 587 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 NFATC2Q13469 925 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 MBTPS1Q14703 1052 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 GPRC6AQ5T6X5 926 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 KDM4DQ6B0I6 523 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 ZNF540Q8NDQ6 660 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 MYO19Q96H55 970 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 PSD2Q9BQI7 771 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 RMND5AQ9H871 391 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 SAMD4AQ9UPU9 718 aaKnown RBP19.87■□□□□ 0.77
NEK3-208ENST00000618534 STK16O75716 305 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 LRATO95237 230 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 CLDN9O95484 217 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 EPORP19235 508 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 EPHA2P29317 976 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 TGFBR1P36897 503 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 HIST2H2ACQ16777 129 aaPredicted RBP19.87■□□□□ 0.77
NEK3-208ENST00000618534 RASAL3Q86YV0 1011 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 SLC22A15Q8IZD6 547 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 MINDY2Q8NBR6 621 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 RPL3LQ92901 407 aaKnown RBP19.87■□□□□ 0.77
NEK3-208ENST00000618534 CDK5RAP1Q96SZ6 601 aaKnown RBP19.87■□□□□ 0.77
NEK3-208ENST00000618534 HERC2P3Q9BVR0 1158 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 TTLL2Q9BWV7 592 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 SLC29A3Q9BZD2 475 aa19.87■□□□□ 0.77
NEK3-208ENST00000618534 SCAMP3O14828 347 aaKnown RBP19.86■□□□□ 0.77
NEK3-208ENST00000618534 CCNDBP1O95273 360 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 KRT6AP02538 564 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 KRT6BP04259 564 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 HOXB6P17509 224 aaKnown RBP19.86■□□□□ 0.77
NEK3-208ENST00000618534 KRT6CP48668 564 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 ST13P50502 369 aaKnown RBP19.86■□□□□ 0.77
NEK3-208ENST00000618534 NEK2P51955 445 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 INAVAQ3KP66 663 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 TTC29Q8NA56 475 aaPredicted RBP19.86■□□□□ 0.77
NEK3-208ENST00000618534 PHF10Q8WUB8 498 aaKnown RBP19.86■□□□□ 0.77
NEK3-208ENST00000618534 PIH1D2Q8WWB5 315 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 HEPHQ9BQS7 1158 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 TM6SF2Q9BZW4 377 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 TM9SF3Q9HD45 589 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 IL1RAPQ9NPH3 570 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 IL26Q9NPH9 171 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 ACOT13Q9NPJ3 140 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 MARCH5Q9NX47 278 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 PIKFYVEQ9Y2I7 2098 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 RGS10O43665 173 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 FAM20BO75063 409 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 ALOX5P09917 674 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 HOXA9P31269 272 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 CXCR4P61073 352 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 ARMC12Q5T9G4 340 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 DSG4Q86SJ6 1040 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 SELENOMQ8WWX9 145 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 ASPSCR1Q9BZE9 553 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 CWH43Q9H720 699 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 POLE4Q9NR33 117 aa19.86■□□□□ 0.77
NEK3-208ENST00000618534 SACM1LQ9NTJ5 587 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms