RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 MPP3Q13368 585 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 TAF1AQ15573 450 aaPredicted RBP4.35□□□□□ -1.71
SNCA-213ENST00000618500 SKOR2Q2VWA4 1001 aaPredicted RBP4.35□□□□□ -1.71
SNCA-213ENST00000618500 HOOK3Q86VS8 718 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 MCATQ8IVS2 390 aaKnown RBP4.35□□□□□ -1.71
SNCA-213ENST00000618500 ZNF655Q8N720 491 aaPredicted RBP4.35□□□□□ -1.71
SNCA-213ENST00000618500 OR4E2Q8NGC2 313 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 AGAP11Q8TF27 550 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 LRRN4Q8WUT4 740 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 NUDT8Q8WV74 236 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 MIEF2Q96C03 454 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 KCTD12Q96CX2 325 aaKnown RBP4.35□□□□□ -1.71
SNCA-213ENST00000618500 VAT1Q99536 393 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 CRB3Q9BUF7 120 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 DEF6Q9H4E7 631 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 ZNF304Q9HCX3 659 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 SPO11Q9Y5K1 396 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 MRFAP1Q9Y605 127 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 ADGRG4Q8IZF6 3080 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 CFAP99D6REC4 459 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 SYT5O00445 386 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 SUN1O94901 812 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 ZWINTO95229 277 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 SP1P08047 785 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 TPBGLP0DKB5 382 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 TFEBP19484 476 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 AGTR2P50052 363 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 MPP1Q00013 466 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 PPP6R3Q5H9R7 873 aaPredicted RBP4.35□□□□□ -1.71
SNCA-213ENST00000618500 ALS2CLQ60I27 953 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 UNC5AQ6ZN44 842 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 LINC00696Q6ZRV3 163 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 KIAA0408Q6ZU52 694 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 IRF2BP2Q7Z5L9 587 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 TMEM200AQ86VY9 491 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 CXorf67Q86X51 503 aaPredicted RBP4.35□□□□□ -1.71
SNCA-213ENST00000618500 CNTD1Q8N815 330 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 CPLX3Q8WVH0 158 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 RND1Q92730 232 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 N4BP2L2Q92802 583 aaPredicted RBP4.35□□□□□ -1.71
SNCA-213ENST00000618500 PPM1MQ96MI6 270 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 TTC25Q96NG3 672 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 FERD3LQ96RJ6 166 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 UGT1A8Q9HAW9 530 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 GLOD4Q9HC38 313 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 C19orf25Q9UFG5 118 aaPredicted RBP4.35□□□□□ -1.71
SNCA-213ENST00000618500 LIMA1Q9UHB6 759 aaKnown RBP4.35□□□□□ -1.71
SNCA-213ENST00000618500 GNPTGQ9UJJ9 305 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 RNF6Q9Y252 685 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 ABCA2Q9BZC7 2435 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 TXNDC9O14530 226 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 PPP1R12AO14974 1030 aaPredicted RBP4.35□□□□□ -1.71
SNCA-213ENST00000618500 KIF5CO60282 957 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 RPN2P04844 631 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 CYP1A2P05177 515 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 TPM2P07951 284 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 ITGAMP11215 1152 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 ERGP11308 486 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 ATP1B2P14415 290 aaPredicted RBP4.35□□□□□ -1.71
SNCA-213ENST00000618500 ABOP16442 354 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 FBLP22087 321 aaKnown RBP4.35□□□□□ -1.71
SNCA-213ENST00000618500 XIAPP98170 497 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 OCA2Q04671 838 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 KLC1Q07866 573 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 ZBTB17Q13105 803 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 PTK6Q13882 451 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 ITIH4Q14624 930 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 HYAL4Q2M3T9 481 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 FKBP15Q5T1M5 1219 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 C1orf189Q5VU69 101 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 ARSKQ6UWY0 536 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 PQLC3Q8N755 202 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 LMNTD1Q8N9Z9 388 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 STT3BQ8TCJ2 826 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 FCRL5Q96RD9 977 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 BDH2Q9BUT1 245 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 POLDIP3Q9BY77 421 aaKnown RBP4.35□□□□□ -1.71
SNCA-213ENST00000618500 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.35□□□□□ -1.71
SNCA-213ENST00000618500 ZDHHC3Q9NYG2 299 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 SPATA7Q9P0W8 599 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 POLEQ07864 2286 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 A0A0A6YYK5 440 aaPredicted RBP4.34□□□□□ -1.71
SNCA-213ENST00000618500 SLC5A10A0PJK1 596 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 LRRC10BA6NIK2 292 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 LGALS16A8MUM7 142 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 KIAA1324LA8MWY0 1029 aaPredicted RBP4.34□□□□□ -1.71
SNCA-213ENST00000618500 H0YIG0 161 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 MT-CYBP00156 380 aaPredicted RBP4.34□□□□□ -1.71
SNCA-213ENST00000618500 IGHG3P01860 377 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 ATP5DP30049 168 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 NR2C2P49116 596 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 POLR2FP61218 127 aaKnown RBP4.34□□□□□ -1.71
SNCA-213ENST00000618500 ITKQ08881 620 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 PDK1Q15118 436 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 TAZQ16635 292 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 HADHQ16836 314 aaKnown RBP4.34□□□□□ -1.71
SNCA-213ENST00000618500 FLYWCH1Q4VC44 716 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 CATSPEREQ5SY80 951 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 TMEM198Q66K66 360 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 SLC25A25Q6KCM7 469 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms