RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 PIPSLA2A3N6 862 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 A8MT66 165 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 PI15O43692 258 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 IPO13O94829 963 aaKnown RBP11.99□□□□□ -0.49
MATR3-227ENST00000618441 PGK1P00558 417 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 STSP08842 583 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 SBK3P0C264 359 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 DSC1Q08554 894 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 MFSD10Q14728 455 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 ZSWIM7Q19AV6 140 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 PKN3Q6P5Z2 889 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 FAM183BPQ6ZVS7 135 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 PELI3Q8N2H9 469 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 LRRC17Q8N6Y2 441 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 TWIST2Q8WVJ9 160 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 TTC9Q92623 222 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 TMEM203Q969S6 136 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 DUS3LQ96G46 650 aaKnown RBP11.99□□□□□ -0.49
MATR3-227ENST00000618441 ZNF768Q9H5H4 540 aaKnown RBP11.99□□□□□ -0.49
MATR3-227ENST00000618441 TMPRSS4Q9NRS4 437 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 COPZ2Q9P299 210 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 DNAJB9Q9UBS3 223 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 CNTNAP1P78357 1384 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 LOC102723532A0A0G2JNH3 316 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 FXYD1O00168 92 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 ARVCFO00192 962 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 NCAM2O15394 837 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 NDUFS6O75380 124 aaKnown RBP11.99□□□□□ -0.49
MATR3-227ENST00000618441 MICAL2O94851 1124 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 AP2A2O94973 939 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 ZNF143P52747 638 aaPredicted RBP11.99□□□□□ -0.49
MATR3-227ENST00000618441 C21orf58P58505 322 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 PRKCDQ05655 676 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 MTMR1Q13613 665 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 MFSD13AQ14CX5 517 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 RNASE12Q5GAN4 147 aaKnown RBP11.99□□□□□ -0.49
MATR3-227ENST00000618441 ZNF667Q5HYK9 610 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 MOB2Q70IA6 237 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 DCP1BQ8IZD4 617 aaKnown RBP11.99□□□□□ -0.49
MATR3-227ENST00000618441 C12orf29Q8N999 325 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 HDHD2Q9H0R4 259 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 SMURF1Q9HCE7 757 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 NEUROD4Q9HD90 331 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 DNAJC11Q9NVH1 559 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 PDP1Q9P0J1 537 aaPredicted RBP11.99□□□□□ -0.49
MATR3-227ENST00000618441 HACL1Q9UJ83 578 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 MGAT4BQ9UQ53 548 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 ZNF451Q9Y4E5 1061 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 BRWD3Q6RI45 1802 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 TTC24A2A3L6 582 aaPredicted RBP11.99□□□□□ -0.49
MATR3-227ENST00000618441 CCL22O00626 93 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 PPM1BO75688 479 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 S100A6P06703 90 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 LCP1P13796 627 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 GPX3P22352 226 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 HRH2P25021 359 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 SCNN1GP51170 649 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 FOXA1P55317 472 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 MVKQ03426 396 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 FGL2Q14314 439 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 SYPL2Q5VXT5 272 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 NADSYN1Q6IA69 706 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 NIPA2Q8N8Q9 360 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 OR2T12Q8NG77 320 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 DNAJA4Q8WW22 397 aaPredicted RBP11.99□□□□□ -0.49
MATR3-227ENST00000618441 PARK7Q99497 189 aaKnown RBP11.99□□□□□ -0.49
MATR3-227ENST00000618441 CRISPLD1Q9H336 500 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 RNF181Q9P0P0 153 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 COL20A1Q9P218 1284 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 ZNF490Q9ULM2 529 aaPredicted RBP11.99□□□□□ -0.49
MATR3-227ENST00000618441 PCDHB5Q9Y5E4 795 aa11.99□□□□□ -0.49
MATR3-227ENST00000618441 B4DXG7 233 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 NT5C1B-RDH14C9J2C7 533 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 NPR3P17342 541 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 ICAM3P32942 547 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 CRISP3P54108 245 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 EPHA5P54756 1037 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 UGT2B15P54855 530 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 GPR19Q15760 415 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 UGT3A2Q3SY77 523 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 DGKKQ5KSL6 1271 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 SYT6Q5T7P8 510 aaPredicted RBP11.98□□□□□ -0.49
MATR3-227ENST00000618441 LAIR2Q6ISS4 152 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 EIF3MQ7L2H7 374 aaKnown RBP11.98□□□□□ -0.49
MATR3-227ENST00000618441 ABI3BPQ7Z7G0 1075 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 TMEM179BQ7Z7N9 219 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 GALNT10Q86SR1 603 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 TINAGL1Q9GZM7 467 aaPredicted RBP11.98□□□□□ -0.49
MATR3-227ENST00000618441 ABCG8Q9H221 673 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 MIOSQ9NXC5 875 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 IKZF3Q9UKT9 509 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 A0A1W2PP18 115 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 TTLL8A6PVC2 850 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 NFKBIEO00221 500 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 ITGB5P18084 799 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 CSTF2P33240 577 aaKnown RBP eCLIP11.98□□□□□ -0.49
MATR3-227ENST00000618441 HMGCS2P54868 508 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 RPS7P62081 194 aaKnown RBP11.98□□□□□ -0.49
MATR3-227ENST00000618441 GNASQ5JWF2 1037 aa11.98□□□□□ -0.49
MATR3-227ENST00000618441 RAB44Q7Z6P3 723 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms