RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 RAD18Q9NS91 495 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 EPS15L1Q9UBC2 864 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 USP22Q9UPT9 525 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 WDR37Q9Y2I8 494 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 CCL27Q9Y4X3 112 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 CKAP5Q14008 2032 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 TRBV23OR9-2A0A075B6M9 112 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 PRORSD1PA6NEY8 169 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 SAP18O00422 153 aaKnown RBP7.57□□□□□ -1.2
NEK3-207ENST00000617054 KPNA5O15131 536 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 SLC22A3O75751 556 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 PRR35P0CG20 571 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 MPC1LP0DKB6 136 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 TACR1P25103 407 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 TNFRSF4P43489 277 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 SLC6A12P48065 614 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 ADPRHP54922 357 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 STX5Q13190 355 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 ZNF423Q2M1K9 1284 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 ZNF658BQ4V348 819 aaPredicted RBP7.57□□□□□ -1.2
NEK3-207ENST00000617054 RABL3Q5HYI8 236 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 SLC2A7Q6PXP3 512 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 NET1Q7Z628 596 aaPredicted RBP7.57□□□□□ -1.2
NEK3-207ENST00000617054 FAM20CQ8IXL6 584 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 OR2T3Q8NH03 318 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 HMGB4Q8WW32 186 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 JPH3Q8WXH2 748 aaPredicted RBP7.57□□□□□ -1.2
NEK3-207ENST00000617054 NEIL2Q969S2 332 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 NTMT1Q9BV86 223 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 EBPLQ9BY08 206 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 SLC17A9Q9BYT1 436 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 SAP130Q9H0E3 1048 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 ELOVL6Q9H5J4 265 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 EGFL7Q9UHF1 273 aa7.57□□□□□ -1.2
NEK3-207ENST00000617054 SHISA7A6NL88 538 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 ANGPT2O15123 496 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 RNGTTO60942 597 aaKnown RBP7.56□□□□□ -1.2
NEK3-207ENST00000617054 GBAP04062 536 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 EBLN1P0CF75 366 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 IDO1P14902 403 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 SLC7A2P52569 658 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 ERVK-8P63133 956 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 IRF8Q02556 426 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 GRSF1Q12849 480 aaKnown RBP eCLIP7.56□□□□□ -1.2
NEK3-207ENST00000617054 DOC2AQ14183 400 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 PIGGQ5H8A4 983 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 CYP20A1Q6UW02 462 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 C16orf89Q6UX73 402 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 AMZ2Q86W34 360 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 LIX1Q8N485 282 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 ZNF740Q8NDX6 193 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 CDC26Q8NHZ8 85 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 FAM110BQ8TC76 370 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 SPDL1Q96EA4 605 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 APIPQ96GX9 242 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 MRGPRX1Q96LB2 322 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 SLC25A23Q9BV35 468 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 NUSAP1Q9BXS6 441 aaKnown RBP7.56□□□□□ -1.2
NEK3-207ENST00000617054 WDR26Q9H7D7 661 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 DCLRE1BQ9H816 532 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 DNAJC11Q9NVH1 559 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 AIG1Q9NVV5 245 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 NFKBIL1Q9UBC1 381 aaPredicted RBP7.56□□□□□ -1.2
NEK3-207ENST00000617054 DLGAP4Q9Y2H0 992 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 NDUFAF1Q9Y375 327 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 OR52A4PA6NMU1 304 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 CHUKO15111 745 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 ADH1BP00325 375 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 CATP04040 527 aaKnown RBP7.56□□□□□ -1.2
NEK3-207ENST00000617054 EFNA1P20827 205 aaPredicted RBP7.56□□□□□ -1.2
NEK3-207ENST00000617054 PXNP49023 591 aaPredicted RBP7.56□□□□□ -1.2
NEK3-207ENST00000617054 CLCNKAP51800 687 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 POLR2JP52435 117 aaKnown RBP7.56□□□□□ -1.2
NEK3-207ENST00000617054 MRPS22P82650 360 aaKnown RBP7.56□□□□□ -1.2
NEK3-207ENST00000617054 THEMIS2Q5TEJ8 643 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 BLOC1S3Q6QNY0 202 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 PGAM4Q8N0Y7 254 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 PGBD3Q8N328 593 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 RAB7BQ96AH8 199 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 COX14Q96I36 57 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 FOPNLQ96NB1 174 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 TSSK3Q96PN8 268 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 ZDHHC5Q9C0B5 715 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 SLC52A3Q9NQ40 469 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 RIC8BQ9NVN3 520 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 TMCO1Q9UM00 188 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 GPSM3Q9Y4H4 160 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 TCRBV21S2A2A0A5A6 115 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 CCDC154A6NI56 674 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 WFS1O76024 890 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 ETHE1O95571 254 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 C1QCP02747 245 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 PCNAP12004 261 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 GNAZP19086 355 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 PSMB5P28074 263 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 HNMTP50135 292 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 TBPL1P62380 186 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 TPRG1LQ5T0D9 272 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 C6orf163Q5TEZ5 329 aa7.56□□□□□ -1.2
NEK3-207ENST00000617054 TMPRSS11BQ86T26 416 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms