RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 LSM7Q9UK45 103 aaKnown RBP13.47□□□□□ -0.25
HPS1-215ENST00000613394 SAMD4AQ9UPU9 718 aaKnown RBP13.47□□□□□ -0.25
HPS1-215ENST00000613394 SLC45A1Q9Y2W3 748 aa13.47□□□□□ -0.25
HPS1-215ENST00000613394 SYN3O14994 580 aa13.47□□□□□ -0.25
HPS1-215ENST00000613394 SMAD6O43541 496 aaKnown RBP13.47□□□□□ -0.25
HPS1-215ENST00000613394 CYP7B1O75881 506 aa13.47□□□□□ -0.25
HPS1-215ENST00000613394 KLKB1P03952 638 aa13.47□□□□□ -0.25
HPS1-215ENST00000613394 TGFBR1P36897 503 aa13.47□□□□□ -0.25
HPS1-215ENST00000613394 EMX1Q04741 257 aaPredicted RBP13.47□□□□□ -0.25
HPS1-215ENST00000613394 CCDC92Q53HC0 331 aaPredicted RBP13.47□□□□□ -0.25
HPS1-215ENST00000613394 TXNDC8Q6A555 127 aa13.47□□□□□ -0.25
HPS1-215ENST00000613394 RSPO2Q6UXX9 243 aaPredicted RBP13.47□□□□□ -0.25
HPS1-215ENST00000613394 TMEM179BQ7Z7N9 219 aa13.47□□□□□ -0.25
HPS1-215ENST00000613394 RBM12BQ8IXT5 1001 aaKnown RBP13.47□□□□□ -0.25
HPS1-215ENST00000613394 OR8J3Q8NGG0 315 aa13.47□□□□□ -0.25
HPS1-215ENST00000613394 TRUB1Q8WWH5 349 aaKnown RBP13.47□□□□□ -0.25
HPS1-215ENST00000613394 PEX13Q92968 403 aa13.47□□□□□ -0.25
HPS1-215ENST00000613394 OSBPL10Q9BXB5 764 aa13.47□□□□□ -0.25
HPS1-215ENST00000613394 WDR12Q9GZL7 423 aaKnown RBP13.47□□□□□ -0.25
HPS1-215ENST00000613394 MYO9BQ13459 2157 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 CNOT3O75175 753 aaKnown RBP13.46□□□□□ -0.25
HPS1-215ENST00000613394 OR56A5P0C7T3 313 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 CKBP12277 381 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 GJA1P17302 382 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 MRPS15P82914 257 aaKnown RBP13.46□□□□□ -0.25
HPS1-215ENST00000613394 GPR17Q13304 367 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 CDK5R2Q13319 367 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 RFX4Q33E94 735 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 SETMARQ53H47 684 aaPredicted RBP13.46□□□□□ -0.25
HPS1-215ENST00000613394 C8orf82Q6P1X6 216 aaPredicted RBP13.46□□□□□ -0.25
HPS1-215ENST00000613394 COLGALT2Q8IYK4 626 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 C2orf73Q8N5S3 287 aaPredicted RBP13.46□□□□□ -0.25
HPS1-215ENST00000613394 TPK1Q9H3S4 243 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 WDR70Q9NW82 654 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 TMEM161AQ9NX61 479 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 ERGIC3Q9Y282 383 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 KRBA1A5PL33 1030 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 EFCAB9A8MZ26 197 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 SAP18O00422 153 aaKnown RBP13.46□□□□□ -0.25
HPS1-215ENST00000613394 AIREO43918 545 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 TRBC1P01850 177 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 SERPINA4P29622 427 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 IDUAP35475 653 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 HPCAL1P37235 193 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 OR1E2P47887 323 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 MED22Q15528 200 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 CYP2U1Q7Z449 544 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 CLECL1Q8IZS7 167 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 PDPRQ8NCN5 879 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 MAL2Q969L2 176 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 SH3KBP1Q96B97 665 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 PKMYT1Q99640 499 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 BARD1Q99728 777 aaKnown RBP13.46□□□□□ -0.25
HPS1-215ENST00000613394 TUBA1CQ9BQE3 449 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 COPS4Q9BT78 406 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 ELOVL2Q9NXB9 296 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 IL17CQ9P0M4 197 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 ABCG2Q9UNQ0 655 aa13.46□□□□□ -0.25
HPS1-215ENST00000613394 ZNF646O15015 1829 aaPredicted RBP13.46□□□□□ -0.26
HPS1-215ENST00000613394 PNMA8CA0A1B0GUJ8 204 aa13.46□□□□□ -0.26
HPS1-215ENST00000613394 MANSC4A6NHS7 340 aaPredicted RBP13.46□□□□□ -0.26
HPS1-215ENST00000613394 ZNF701M0R085 212 aaPredicted RBP13.46□□□□□ -0.26
HPS1-215ENST00000613394 M0R129 80 aa13.46□□□□□ -0.26
HPS1-215ENST00000613394 AXIN1O15169 862 aa13.46□□□□□ -0.26
HPS1-215ENST00000613394 UGT2B11O75310 529 aa13.46□□□□□ -0.26
HPS1-215ENST00000613394 STC2O76061 302 aa13.46□□□□□ -0.26
HPS1-215ENST00000613394 APOA1P02647 267 aa13.46□□□□□ -0.26
HPS1-215ENST00000613394 NKX2-5P52952 324 aaPredicted RBP13.46□□□□□ -0.26
HPS1-215ENST00000613394 ILF2Q12905 390 aaKnown RBP13.46□□□□□ -0.26
HPS1-215ENST00000613394 NFATC2Q13469 925 aa13.46□□□□□ -0.26
HPS1-215ENST00000613394 NAE1Q13564 534 aa13.46□□□□□ -0.26
HPS1-215ENST00000613394 SCML4Q8N228 414 aa13.46□□□□□ -0.26
HPS1-215ENST00000613394 GLB1L3Q8NCI6 653 aaPredicted RBP13.46□□□□□ -0.26
HPS1-215ENST00000613394 ZNF548Q8NEK5 533 aaPredicted RBP13.46□□□□□ -0.26
HPS1-215ENST00000613394 GTPBP3Q969Y2 492 aaKnown RBP13.46□□□□□ -0.26
HPS1-215ENST00000613394 SH3YL1Q96HL8 342 aaPredicted RBP13.46□□□□□ -0.26
HPS1-215ENST00000613394 ZNF347Q96SE7 839 aa13.46□□□□□ -0.26
HPS1-215ENST00000613394 SLC6A13Q9NSD5 602 aa13.46□□□□□ -0.26
HPS1-215ENST00000613394 MYO10Q9HD67 2058 aa13.45□□□□□ -0.26
HPS1-215ENST00000613394 PQBP1O60828 265 aaKnown RBP13.45□□□□□ -0.26
HPS1-215ENST00000613394 ERN1O75460 977 aaKnown RBP13.45□□□□□ -0.26
HPS1-215ENST00000613394 TSPAN12O95859 305 aa13.45□□□□□ -0.26
HPS1-215ENST00000613394 IGSF6O95976 241 aa13.45□□□□□ -0.26
HPS1-215ENST00000613394 CHI3L1P36222 383 aaPredicted RBP13.45□□□□□ -0.26
HPS1-215ENST00000613394 AQP6Q13520 282 aa13.45□□□□□ -0.26
HPS1-215ENST00000613394 SBSNQ6UWP8 590 aa13.45□□□□□ -0.26
HPS1-215ENST00000613394 SNX20Q7Z614 316 aa13.45□□□□□ -0.26
HPS1-215ENST00000613394 GALNT7Q86SF2 657 aa13.45□□□□□ -0.26
HPS1-215ENST00000613394 RTN4RL1Q86UN2 441 aaPredicted RBP13.45□□□□□ -0.26
HPS1-215ENST00000613394 TMEM173Q86WV6 379 aaPredicted RBP13.45□□□□□ -0.26
HPS1-215ENST00000613394 BEND7Q8N7W2 519 aaPredicted RBP13.45□□□□□ -0.26
HPS1-215ENST00000613394 PROX1Q92786 737 aa13.45□□□□□ -0.26
HPS1-215ENST00000613394 HSH2DQ96JZ2 352 aa13.45□□□□□ -0.26
HPS1-215ENST00000613394 ATP13A3Q9H7F0 1226 aa13.45□□□□□ -0.26
HPS1-215ENST00000613394 TNS1Q9HBL0 1735 aaKnown RBP13.45□□□□□ -0.26
HPS1-215ENST00000613394 SUV39H1O43463 412 aa13.45□□□□□ -0.26
HPS1-215ENST00000613394 MFN2O95140 757 aa13.45□□□□□ -0.26
HPS1-215ENST00000613394 NPPAP01160 153 aa13.45□□□□□ -0.26
HPS1-215ENST00000613394 SERPIND1P05546 499 aa13.45□□□□□ -0.26
HPS1-215ENST00000613394 BMP1P13497 986 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms