RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 PSMF1Q92530 271 aa22.42■■□□□ 1.18
MMP28-203ENST00000612672 ZNF160Q9HCG1 818 aa22.42■■□□□ 1.18
MMP28-203ENST00000612672 INTUQ9ULD6 942 aa22.42■■□□□ 1.18
MMP28-203ENST00000612672 ITPR3Q14573 2671 aa22.41■■□□□ 1.18
MMP28-203ENST00000612672 MED13LQ71F56 2210 aa22.41■■□□□ 1.18
MMP28-203ENST00000612672 KRT87PA6NCN2 255 aa22.41■■□□□ 1.18
MMP28-203ENST00000612672 GOLGA6L19H0YKK7 550 aa22.41■■□□□ 1.18
MMP28-203ENST00000612672 PJA2O43164 708 aa22.41■■□□□ 1.18
MMP28-203ENST00000612672 CTSVO60911 334 aa22.41■■□□□ 1.18
MMP28-203ENST00000612672 WISP2O76076 250 aa22.41■■□□□ 1.18
MMP28-203ENST00000612672 SNRPB2P08579 225 aaKnown RBP22.41■■□□□ 1.18
MMP28-203ENST00000612672 RBP3P10745 1247 aa22.41■■□□□ 1.18
MMP28-203ENST00000612672 SOX11P35716 441 aa22.41■■□□□ 1.18
MMP28-203ENST00000612672 NSG1P42857 185 aa22.41■■□□□ 1.18
MMP28-203ENST00000612672 RAB28P51157 221 aa22.41■■□□□ 1.18
MMP28-203ENST00000612672 ARSFP54793 590 aa22.41■■□□□ 1.18
MMP28-203ENST00000612672 EIF3EP60228 445 aaKnown RBP22.41■■□□□ 1.18
MMP28-203ENST00000612672 PRPSAP1Q14558 356 aa22.41■■□□□ 1.18
MMP28-203ENST00000612672 PACS1Q6VY07 963 aa22.41■■□□□ 1.18
MMP28-203ENST00000612672 CDKL3Q8IVW4 592 aaPredicted RBP22.41■■□□□ 1.18
MMP28-203ENST00000612672 PRSS58Q8IYP2 241 aa22.41■■□□□ 1.18
MMP28-203ENST00000612672 CCDC120Q96HB5 630 aa22.41■■□□□ 1.18
MMP28-203ENST00000612672 LURAP1Q96LR2 239 aa22.41■■□□□ 1.18
MMP28-203ENST00000612672 MAGEB10Q96LZ2 347 aaPredicted RBP22.41■■□□□ 1.18
MMP28-203ENST00000612672 ZNHIT6Q9NWK9 470 aaKnown RBP22.41■■□□□ 1.18
MMP28-203ENST00000612672 STOX2Q9P2F5 926 aaPredicted RBP22.41■■□□□ 1.18
MMP28-203ENST00000612672 METTL18O95568 372 aa22.4■■□□□ 1.18
MMP28-203ENST00000612672 F10P00742 488 aa22.4■■□□□ 1.18
MMP28-203ENST00000612672 CELA2AP08217 269 aa22.4■■□□□ 1.18
MMP28-203ENST00000612672 KLC1Q07866 573 aa22.4■■□□□ 1.18
MMP28-203ENST00000612672 ART3Q13508 389 aa22.4■■□□□ 1.18
MMP28-203ENST00000612672 ITIH4Q14624 930 aa22.4■■□□□ 1.18
MMP28-203ENST00000612672 SYTL3Q4VX76 610 aa22.4■■□□□ 1.18
MMP28-203ENST00000612672 IRAK1BP1Q5VVH5 260 aa22.4■■□□□ 1.18
MMP28-203ENST00000612672 FIGLAQ6QHK4 219 aa22.4■■□□□ 1.18
MMP28-203ENST00000612672 ARHGEF18Q6ZSZ5 1173 aa22.4■■□□□ 1.18
MMP28-203ENST00000612672 NR4A3Q92570 626 aa22.4■■□□□ 1.18
MMP28-203ENST00000612672 CRB3Q9BUF7 120 aa22.4■■□□□ 1.18
MMP28-203ENST00000612672 ENAMQ9NRM1 1142 aa22.4■■□□□ 1.18
MMP28-203ENST00000612672 SEMA3GQ9NS98 782 aa22.4■■□□□ 1.18
MMP28-203ENST00000612672 CACNA1CQ13936 2221 aa22.4■■□□□ 1.18
MMP28-203ENST00000612672 CCDC162PA2VCL2 907 aa22.39■■□□□ 1.17
MMP28-203ENST00000612672 FITM1A5D6W6 292 aa22.39■■□□□ 1.17
MMP28-203ENST00000612672 FTH1P02794 183 aa22.39■■□□□ 1.17
MMP28-203ENST00000612672 PSMA3P25788 255 aa22.39■■□□□ 1.17
MMP28-203ENST00000612672 MSNP26038 577 aaKnown RBP22.39■■□□□ 1.17
MMP28-203ENST00000612672 MST1P26927 711 aa22.39■■□□□ 1.17
MMP28-203ENST00000612672 CCR7P32248 378 aa22.39■■□□□ 1.17
MMP28-203ENST00000612672 TRIM14Q14142 442 aa22.39■■□□□ 1.17
MMP28-203ENST00000612672 CCDC38Q502W7 563 aa22.39■■□□□ 1.17
MMP28-203ENST00000612672 FRMPD2BQ6IN97 320 aa22.39■■□□□ 1.17
MMP28-203ENST00000612672 DARS2Q6PI48 645 aaKnown RBP22.39■■□□□ 1.17
MMP28-203ENST00000612672 TMTC1Q8IUR5 882 aa22.39■■□□□ 1.17
MMP28-203ENST00000612672 BRIX1Q8TDN6 353 aaKnown RBP22.39■■□□□ 1.17
MMP28-203ENST00000612672 STYXQ8WUJ0 223 aa22.39■■□□□ 1.17
MMP28-203ENST00000612672 LMF1Q96S06 567 aa22.39■■□□□ 1.17
MMP28-203ENST00000612672 FEZ2Q9UHY8 353 aaPredicted RBP22.39■■□□□ 1.17
MMP28-203ENST00000612672 MROH6A6NGR9 719 aa22.38■■□□□ 1.17
MMP28-203ENST00000612672 PRICKLE3O43900 615 aaPredicted RBP22.38■■□□□ 1.17
MMP28-203ENST00000612672 HPP00738 406 aa22.38■■□□□ 1.17
MMP28-203ENST00000612672 COX6A1P12074 109 aa22.38■■□□□ 1.17
MMP28-203ENST00000612672 CD9P21926 228 aa22.38■■□□□ 1.17
MMP28-203ENST00000612672 PSMB5P28074 263 aa22.38■■□□□ 1.17
MMP28-203ENST00000612672 TNFSF10P50591 281 aa22.38■■□□□ 1.17
MMP28-203ENST00000612672 ZXDCQ2QGD7 858 aaPredicted RBP22.38■■□□□ 1.17
MMP28-203ENST00000612672 CCDC181Q5TID7 509 aa22.38■■□□□ 1.17
MMP28-203ENST00000612672 LAPTM4BQ86VI4 370 aa22.38■■□□□ 1.17
MMP28-203ENST00000612672 VSTM4Q8IW00 320 aa22.38■■□□□ 1.17
MMP28-203ENST00000612672 SLC22A15Q8IZD6 547 aa22.38■■□□□ 1.17
MMP28-203ENST00000612672 STT3BQ8TCJ2 826 aa22.38■■□□□ 1.17
MMP28-203ENST00000612672 SELENOSQ9BQE4 189 aa22.38■■□□□ 1.17
MMP28-203ENST00000612672 TRIM8Q9BZR9 551 aa22.38■■□□□ 1.17
MMP28-203ENST00000612672 SYNPO2LQ9H987 977 aa22.38■■□□□ 1.17
MMP28-203ENST00000612672 PTGFRNQ9P2B2 879 aa22.38■■□□□ 1.17
MMP28-203ENST00000612672 NXT1Q9UKK6 140 aaKnown RBP22.38■■□□□ 1.17
MMP28-203ENST00000612672 KLF2Q9Y5W3 355 aaPredicted RBP22.38■■□□□ 1.17
MMP28-203ENST00000612672 HEATR9A2RTY3 570 aa22.37■■□□□ 1.17
MMP28-203ENST00000612672 PIM1P11309 404 aaPredicted RBP22.37■■□□□ 1.17
MMP28-203ENST00000612672 VSX2P58304 361 aaPredicted RBP22.37■■□□□ 1.17
MMP28-203ENST00000612672 ARG2P78540 354 aa22.37■■□□□ 1.17
MMP28-203ENST00000612672 SEMA3AQ14563 771 aa22.37■■□□□ 1.17
MMP28-203ENST00000612672 GRM7Q14831 915 aa22.37■■□□□ 1.17
MMP28-203ENST00000612672 ATG9BQ674R7 924 aa22.37■■□□□ 1.17
MMP28-203ENST00000612672 C11orf63Q6NUN7 778 aa22.37■■□□□ 1.17
MMP28-203ENST00000612672 NLRP9Q7RTR0 991 aa22.37■■□□□ 1.17
MMP28-203ENST00000612672 SIRT6Q8N6T7 355 aa22.37■■□□□ 1.17
MMP28-203ENST00000612672 OR13J1Q8NGT2 312 aa22.37■■□□□ 1.17
MMP28-203ENST00000612672 OSBPL8Q9BZF1 889 aa22.37■■□□□ 1.17
MMP28-203ENST00000612672 LUC7LQ9NQ29 371 aaKnown RBP22.37■■□□□ 1.17
MMP28-203ENST00000612672 SLC2A6Q9UGQ3 507 aa22.37■■□□□ 1.17
MMP28-203ENST00000612672 LOC105369274A0A096LPK9 316 aa22.36■■□□□ 1.17
MMP28-203ENST00000612672 LOC102723532A0A0G2JNH3 316 aa22.36■■□□□ 1.17
MMP28-203ENST00000612672 IQCF5A8MTL0 148 aa22.36■■□□□ 1.17
MMP28-203ENST00000612672 FFAR3O14843 346 aa22.36■■□□□ 1.17
MMP28-203ENST00000612672 GPR42O15529 346 aa22.36■■□□□ 1.17
MMP28-203ENST00000612672 ZGLP1P0C6A0 271 aa22.36■■□□□ 1.17
MMP28-203ENST00000612672 PRR35P0CG20 571 aa22.36■■□□□ 1.17
MMP28-203ENST00000612672 ACPPP15309 386 aa22.36■■□□□ 1.17
MMP28-203ENST00000612672 CTNNA1P35221 906 aaKnown RBP22.36■■□□□ 1.17
MMP28-203ENST00000612672 ANP32AP39687 249 aaKnown RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms