RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 TSTA3Q13630 321 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 GRIN2CQ14957 1233 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 PON2Q15165 354 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 FAM98BQ52LJ0 330 aaKnown RBP13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 TCEAL5Q5H9L2 206 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 LYPLAL1Q5VWZ2 237 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 SPESP1Q6UW49 350 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 CYP2U1Q7Z449 544 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 OR8J3Q8NGG0 315 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 FRS2Q8WU20 508 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 WRAP53Q9BUR4 548 aaKnown RBP13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 SLC12A9Q9BXP2 914 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 MUC13Q9H3R2 512 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 VNN3Q9NY84 501 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 E7EQ34 232 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 YY2O15391 372 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 TSPAN6O43657 245 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 KRT6AP02538 564 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 KRT6BP04259 564 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 HIST1H2AGP0C0S8 130 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 MSH3P20585 1137 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 HIST1H2ADP20671 130 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 PDHA2P29803 388 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 KRT6CP48668 564 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 PFN3P60673 137 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 SPIDRQ14159 915 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 MAP7Q14244 749 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 CLECL1Q8IZS7 167 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 IRF7Q92985 503 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 HIST1H2AHQ96KK5 128 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 TOX2Q96NM4 488 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 SAMD11Q96NU1 681 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 HIST1H2AJQ99878 128 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 DPH2Q9BQC3 489 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 H2AFJQ9BTM1 129 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 NPLQ9BXD5 320 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 TOR3AQ9H497 397 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 KAT8Q9H7Z6 458 aaKnown RBP13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 POLR1BQ9H9Y6 1135 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 ZNF639Q9UID6 485 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 GOLGA4Q13439 2230 aaKnown RBP13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 IGLV3-16A0A075B6K0 115 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 ETHE1O95571 254 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 ALBP02768 609 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 ALPLP05186 524 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 PFKLP17858 780 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 S100A3P33764 101 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 STT3AP46977 705 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 SLC6A12P48065 614 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 GPR107Q5VW38 600 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 DOK6Q6PKX4 331 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 HOMEZQ8IX15 550 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 REM2Q8IYK8 340 aaPredicted RBP13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 GOLM1Q8NBJ4 401 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 LRRC3BQ96PB8 259 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 NRTNQ99748 197 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 MYOCQ99972 504 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 FAM83DQ9H4H8 585 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 BTBD3Q9Y2F9 522 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 TRBV5-3A0A0A0MS03 114 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 ARHGEF33A8MVX0 844 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 GNGT2O14610 69 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 PRSS23O95084 383 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 NPPAP01160 153 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 IL6P05231 212 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 EEF1B2P24534 225 aaKnown RBP13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 PTPN6P29350 595 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 TBC1D25Q3MII6 688 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 CES5AQ6NT32 575 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 ABRAXAS1Q6UWZ7 409 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 TMEM26Q6ZUK4 368 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 KCTD8Q6ZWB6 473 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 NECAB2Q7Z6G3 386 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 PATL1Q86TB9 770 aaKnown RBP13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 SFTPA1Q8IWL2 248 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 ELMOD1Q8N336 334 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 HM13Q8TCT9 377 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 AMBRA1Q9C0C7 1298 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 IFT80Q9P2H3 777 aaPredicted RBP13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 FBXO10Q9UK96 956 aa13.69□□□□□ -0.22
PCDHGA3-202ENST00000612467 G3V2T6 193 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 PER2O15055 1255 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 MITFO75030 526 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 DEAF1O75398 565 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 GMNNO75496 209 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 CREG1O75629 220 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 GBAP04062 536 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 CDK4P11802 303 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 IRS1P35568 1242 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 DAG1Q14118 895 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 LRRC23Q53EV4 343 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 GPR141Q7Z602 305 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 MICU2Q8IYU8 434 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 FAM120BQ96EK7 910 aaKnown RBP13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 CPPED1Q9BRF8 314 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 SPHK2Q9NRA0 654 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 TDP1Q9NUW8 608 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 ZNF510Q9Y2H8 683 aa13.68□□□□□ -0.22
PCDHGA3-202ENST00000612467 LTBP2Q14767 1821 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms