RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 FAM180BQ6P0A1 224 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 DSG4Q86SJ6 1040 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 HORMAD1Q86X24 394 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 ZBTB8BQ8NAP8 495 aaPredicted RBP13.7□□□□□ -0.22
COL6A1-207ENST00000612273 OR8J3Q8NGG0 315 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 HPS1Q92902 700 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 P2RY12Q9H244 342 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 TRPM5Q9NZQ8 1165 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 TMEFF2Q9UIK5 374 aaPredicted RBP13.7□□□□□ -0.22
COL6A1-207ENST00000612273 ERGIC3Q9Y282 383 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 CCL27Q9Y4X3 112 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 A0A0C4DFX4 3053 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 GLYATL1P3A0A0U1RQE8 302 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 KRBA1A5PL33 1030 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 VIPP01282 170 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 HMGCLP35914 325 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 HPCAL1P37235 193 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 IFITM3Q01628 133 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 BCL2L1Q07817 233 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 SOWAHCQ53LP3 525 aaPredicted RBP13.7□□□□□ -0.22
COL6A1-207ENST00000612273 IRAK1BP1Q5VVH5 260 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 NCEH1Q6PIU2 408 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 RBFAQ8N0V3 343 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 TTPALQ9BTX7 342 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 C1QTNF3Q9BXJ4 246 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 DCAF13Q9NV06 445 aaKnown RBP13.7□□□□□ -0.22
COL6A1-207ENST00000612273 TRIM43BA6NCK2 446 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 OR6C75A6NL08 312 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 SYN3O14994 580 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 POU2F1P14859 743 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 PORP16435 677 aaPredicted RBP13.7□□□□□ -0.22
COL6A1-207ENST00000612273 ZNF12P17014 697 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 VLDLRP98155 873 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 PTCHD3Q3KNS1 767 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 RUNDC3AQ59EK9 446 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 RBM48Q5RL73 367 aaKnown RBP13.7□□□□□ -0.22
COL6A1-207ENST00000612273 SERPINA13PQ6UXR4 307 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 B3GNT8Q7Z7M8 397 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 GPR156Q8NFN8 814 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 FKBP10Q96AY3 582 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 AASDHPPTQ9NRN7 309 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 PPT2Q9UMR5 302 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 TET1Q8NFU7 2136 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 LOC100506127A0A0U1RQW1 187 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 KDM1AO60341 852 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 TMED10P49755 219 aaKnown RBP13.69□□□□□ -0.22
COL6A1-207ENST00000612273 TERB1Q8NA31 727 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 OR5K1Q8NHB7 308 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 FATE1Q969F0 183 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 SCLYQ96I15 445 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 PYURFQ96I23 114 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 REXO5Q96IC2 774 aaKnown RBP13.69□□□□□ -0.22
COL6A1-207ENST00000612273 KLHL25Q9H0H3 589 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 TMEM9Q9P0T7 183 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 LHX3Q9UBR4 397 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 PABPN1LA6NDY0 278 aaKnown RBP13.69□□□□□ -0.22
COL6A1-207ENST00000612273 RECQL5O94762 991 aaPredicted RBP13.69□□□□□ -0.22
COL6A1-207ENST00000612273 CLDN9O95484 217 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 HSMCR30P0CW71 290 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 IDH2P48735 452 aaKnown RBP13.69□□□□□ -0.22
COL6A1-207ENST00000612273 CD97P48960 835 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 DAPP51397 102 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 CLCN4P51793 760 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 ACLYP53396 1101 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 GRSF1Q12849 480 aaKnown RBP eCLIP13.69□□□□□ -0.22
COL6A1-207ENST00000612273 CTF1Q16619 201 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 UBE2R2Q712K3 238 aaPredicted RBP13.69□□□□□ -0.22
COL6A1-207ENST00000612273 DEFB128Q7Z7B8 93 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 VRK3Q8IV63 474 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 STK40Q8N2I9 435 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 TMEM132CQ8N3T6 1108 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 GPR26Q8NDV2 337 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 FAR1Q8WVX9 515 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 TRUB1Q8WWH5 349 aaKnown RBP13.69□□□□□ -0.22
COL6A1-207ENST00000612273 FAM210AQ96ND0 272 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 REXO4Q9GZR2 422 aaKnown RBP13.69□□□□□ -0.22
COL6A1-207ENST00000612273 C6orf62Q9GZU0 229 aaPredicted RBP13.69□□□□□ -0.22
COL6A1-207ENST00000612273 SMG9Q9H0W8 520 aaKnown RBP13.69□□□□□ -0.22
COL6A1-207ENST00000612273 GORASP2Q9H8Y8 452 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 GNPTGQ9UJJ9 305 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 DNAH14Q0VDD8 3507 aa13.69□□□□□ -0.22
COL6A1-207ENST00000612273 A0A096LPI6 279 aa13.68□□□□□ -0.22
COL6A1-207ENST00000612273 EOMESO95936 686 aa13.68□□□□□ -0.22
COL6A1-207ENST00000612273 KRT6AP02538 564 aa13.68□□□□□ -0.22
COL6A1-207ENST00000612273 KRT6BP04259 564 aa13.68□□□□□ -0.22
COL6A1-207ENST00000612273 IL6P05231 212 aa13.68□□□□□ -0.22
COL6A1-207ENST00000612273 DBTP11182 482 aaKnown RBP13.68□□□□□ -0.22
COL6A1-207ENST00000612273 ENGP17813 658 aa13.68□□□□□ -0.22
COL6A1-207ENST00000612273 C21orf33P30042 268 aaPredicted RBP13.68□□□□□ -0.22
COL6A1-207ENST00000612273 KRT6CP48668 564 aa13.68□□□□□ -0.22
COL6A1-207ENST00000612273 CLK1P49759 484 aaKnown RBP13.68□□□□□ -0.22
COL6A1-207ENST00000612273 TTC29Q8NA56 475 aaPredicted RBP13.68□□□□□ -0.22
COL6A1-207ENST00000612273 KCNC2Q96PR1 638 aa13.68□□□□□ -0.22
COL6A1-207ENST00000612273 TUBA1CQ9BQE3 449 aa13.68□□□□□ -0.22
COL6A1-207ENST00000612273 YTHDF1Q9BYJ9 559 aaKnown RBP13.68□□□□□ -0.22
COL6A1-207ENST00000612273 EVPLLA8MZ36 301 aa13.68□□□□□ -0.22
COL6A1-207ENST00000612273 SERPINB7O75635 380 aa13.68□□□□□ -0.22
COL6A1-207ENST00000612273 SCELO95171 688 aa13.68□□□□□ -0.22
COL6A1-207ENST00000612273 ANXA5P08758 320 aa13.68□□□□□ -0.22
COL6A1-207ENST00000612273 OR1E2P47887 323 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms