RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 CARSP49589 748 aaKnown RBP11.88□□□□□ -0.51
CBWD3-208ENST00000612050 CLCN7P51798 805 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 MPP1Q00013 466 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 CAV1Q03135 178 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 LY6DQ14210 128 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 ERV3-1Q14264 604 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 TBR1Q16650 682 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 ACSBG2Q5FVE4 666 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 THEMIS2Q5TEJ8 643 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 SYTL1Q8IYJ3 562 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 DSELQ8IZU8 1212 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 TTC29Q8NA56 475 aaPredicted RBP11.88□□□□□ -0.51
CBWD3-208ENST00000612050 OR1L3Q8NH93 324 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 HMGCLL1Q8TB92 370 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 PROKR1Q8TCW9 393 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 MCOLN3Q8TDD5 553 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 THAP4Q8WY91 577 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 SMPDL3AQ92484 453 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 TRIM44Q96DX7 344 aaPredicted RBP11.88□□□□□ -0.51
CBWD3-208ENST00000612050 RNF31Q96EP0 1072 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 IL17FQ96PD4 163 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 GPR21Q99679 349 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 AARSD1Q9BTE6 412 aaKnown RBP11.88□□□□□ -0.51
CBWD3-208ENST00000612050 ACTL8Q9H568 366 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 NDOR1Q9UHB4 597 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 CIDEBQ9UHD4 219 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 IL17BQ9UHF5 180 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 SNX7Q9UNH6 387 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 FARSAQ9Y285 508 aaKnown RBP11.88□□□□□ -0.51
CBWD3-208ENST00000612050 CDC14CA4D256 554 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 NKX2-8O15522 239 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 ZNF749O43361 778 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 HAUS5O94927 633 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 TUBB4AP04350 444 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 C8GP07360 202 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 RAB40ALP0C0E4 278 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 SLC12A2P55011 1212 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 CUL1Q13616 776 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 GBX1Q14549 363 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 DEFB109BQ30KR1 87 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 HP1BP3Q5SSJ5 553 aaPredicted RBP11.87□□□□□ -0.51
CBWD3-208ENST00000612050 YOD1Q5VVQ6 348 aaPredicted RBP11.87□□□□□ -0.51
CBWD3-208ENST00000612050 FAM45BPQ6NSW5 357 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 FIGLAQ6QHK4 219 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 UBE2R2Q712K3 238 aaPredicted RBP11.87□□□□□ -0.51
CBWD3-208ENST00000612050 GALNT7Q86SF2 657 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 GPATCH11Q8N954 259 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 FAM45AQ8TCE6 357 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 PYROXD1Q8WU10 500 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 BBC3Q96PG8 261 aaPredicted RBP11.87□□□□□ -0.51
CBWD3-208ENST00000612050 ERP44Q9BS26 406 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 DHRS4Q9BTZ2 278 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 EURLQ9NYK6 297 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 WHRNQ9P202 907 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 ANKMY1Q9P2S6 941 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 TUBD1Q9UJT1 453 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 RUVBL2Q9Y230 463 aaKnown RBP11.87□□□□□ -0.51
CBWD3-208ENST00000612050 MAN2B2Q9Y2E5 1009 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 SNX24Q9Y343 169 aa11.87□□□□□ -0.51
CBWD3-208ENST00000612050 EIF3HO15372 352 aaKnown RBP eCLIP11.86□□□□□ -0.51
CBWD3-208ENST00000612050 SRPX2O60687 465 aaPredicted RBP11.86□□□□□ -0.51
CBWD3-208ENST00000612050 BANF1O75531 89 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 WT1P19544 449 aaPredicted RBP11.86□□□□□ -0.51
CBWD3-208ENST00000612050 ALAS2P22557 587 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 MCM3P25205 808 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 IVDP26440 423 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 PNLIPRP1P54315 467 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 POLE2P56282 527 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 IL2P60568 153 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 C2orf54Q08AI8 447 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 MGAT5Q09328 741 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 GPS2Q13227 327 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 SP140Q13342 867 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 GRM7Q14831 915 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 CYP2A13Q16696 494 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 DEFB110Q30KQ9 67 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 FAM214AQ32MH5 1076 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 ZNF789Q5FWF6 425 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 ZNF605Q86T29 641 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 RAB43Q86YS6 212 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 ANKMY2Q8IV38 441 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 CNTN4Q8IWV2 1026 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 CPNE9Q8IYJ1 553 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 ZBED8Q8IZ13 594 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 LMNTD1Q8N9Z9 388 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 LINC01555Q8NAE3 123 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 FBXO15Q8NCQ5 510 aaPredicted RBP11.86□□□□□ -0.51
CBWD3-208ENST00000612050 FBXO36Q8NEA4 188 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 CD200R1Q8TD46 325 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 VPS39Q96JC1 886 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 MIPEPQ99797 713 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 SELENOSQ9BQE4 189 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 NLNQ9BYT8 704 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 CHST8Q9H2A9 424 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 DPH5Q9H2P9 285 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 MRPS30Q9NP92 439 aaKnown RBP11.86□□□□□ -0.51
CBWD3-208ENST00000612050 IFT80Q9P2H3 777 aaPredicted RBP11.86□□□□□ -0.51
CBWD3-208ENST00000612050 TEX264Q9Y6I9 313 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 CFAP47Q6ZTR5 3102 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 ARHGEF33A8MVX0 844 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms