RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 CCND1P24385 295 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 EEF1DP29692 281 aaKnown RBP15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 SHMT2P34897 504 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 HSPA7P48741 367 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 MAZP56270 477 aaKnown RBP15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 GUCY1A3Q02108 690 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 SPEM2Q0P670 501 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 NAE1Q13564 534 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 GPR18Q14330 331 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 PTCHD3Q3KNS1 767 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 TUBB8Q3ZCM7 444 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 ATG16L1Q676U5 607 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 ZCCHC8Q6NZY4 707 aaKnown RBP15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 LRRC70Q7Z2Q7 622 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 TAX1BP1Q86VP1 789 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 ZNF483Q8TF39 744 aaPredicted RBP15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 LCN9Q8WX39 176 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 IL17FQ96PD4 163 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 RTKNQ9BST9 563 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 SGPP1Q9BX95 441 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 ATG10Q9H0Y0 220 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 SLC32A1Q9H598 525 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 SEMA4GQ9NTN9 838 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 OR6C2Q9NZP2 312 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 PCTPQ9UKL6 214 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 PLAGL1Q9UM63 463 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 ICKQ9UPZ9 632 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 ASB1Q9Y576 335 aa15.47■□□□□ 0.07
CLTCL1-207ENST00000611723 LRRC14BA6NHZ5 514 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 LILRA5A6NI73 299 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 TMEM114B3SHH9 223 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 E2F3O00716 465 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 CDX4O14627 284 aaPredicted RBP15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 SNUPNO95149 360 aaKnown RBP15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 NEFHP12036 1026 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 GYS2P54840 703 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 PCDH1Q08174 1060 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 GALNT1Q10472 559 aaPredicted RBP15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 STX3Q13277 289 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 SLC14A1Q13336 389 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 FASTKQ14296 549 aaKnown RBP15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 NR1D2Q14995 579 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 CFAP157Q5JU67 520 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 CES4AQ5XG92 561 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 CAPN13Q6MZZ7 669 aaPredicted RBP15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 ZNF438Q7Z4V0 828 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 AMIGO1Q86WK6 493 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 SLC35F3Q8IY50 421 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 SYTL1Q8IYJ3 562 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 LINC01555Q8NAE3 123 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 KYQ8NBH2 561 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 OR6C4Q8NGE1 309 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 PPP1R14CQ8TAE6 165 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 SMPDL3AQ92484 453 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 ESAMQ96AP7 390 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 TRMOQ9BU70 441 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 DRC3Q9H069 523 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 GSTO2Q9H4Y5 243 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 INTS7Q9NVH2 962 aaKnown RBP15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 CIDEBQ9UHD4 219 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 PCM1Q15154 2024 aa15.46■□□□□ 0.07
CLTCL1-207ENST00000611723 A0A1W2PPV9 198 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 SIGLEC6O43699 453 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 NUDT21O43809 227 aaKnown RBP15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 PRICKLE3O43900 615 aaPredicted RBP15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 FOXD2O60548 495 aaPredicted RBP15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 SNNO75324 88 aaPredicted RBP15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 SUPT7LO94864 414 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 PNLIPP16233 465 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 GLB1P16278 677 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 SDHBP21912 280 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 GDF5P43026 501 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 PIK3CGP48736 1102 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 CLCQ05315 142 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 BST1Q10588 318 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 SF3A2Q15428 464 aaKnown RBP15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 FBXO48Q5FWF7 155 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 ZCCHC23Q6ZST2 131 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 FRMD7Q6ZUT3 714 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 THOC6Q86W42 341 aaKnown RBP15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 CCNYL1Q8N7R7 359 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 OR4E2Q8NGC2 313 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 LRRC8CQ8TDW0 803 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 MIPEPQ99797 713 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 PITPNM3Q9BZ71 974 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 PCBD2Q9H0N5 130 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 XKR8Q9H6D3 395 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 DNAJC11Q9NVH1 559 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 THAP1Q9NVV9 213 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 GPRC5BQ9NZH0 403 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 OPTCQ9UBM4 332 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 PADI4Q9UM07 663 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 SLC22A14Q9Y267 594 aa15.45■□□□□ 0.06
CLTCL1-207ENST00000611723 LY6G6EA0A0G2JKS1 128 aa15.44■□□□□ 0.06
CLTCL1-207ENST00000611723 CCNT2O60583 730 aaKnown RBP15.44■□□□□ 0.06
CLTCL1-207ENST00000611723 MLYCDO95822 493 aa15.44■□□□□ 0.06
CLTCL1-207ENST00000611723 NPPBP16860 134 aa15.44■□□□□ 0.06
CLTCL1-207ENST00000611723 GPR3P46089 330 aa15.44■□□□□ 0.06
CLTCL1-207ENST00000611723 EPHA4P54764 986 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms