RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 SLC28A1O00337 649 aa14.75□□□□□ -0.05
PCDHGB1-202ENST00000611598 MANBAO00462 879 aa14.75□□□□□ -0.05
PCDHGB1-202ENST00000611598 PCDHGA12O60330 932 aa14.75□□□□□ -0.05
PCDHGB1-202ENST00000611598 F11P03951 625 aa14.75□□□□□ -0.05
PCDHGB1-202ENST00000611598 PCYT1AP49585 367 aa14.75□□□□□ -0.05
PCDHGB1-202ENST00000611598 SGSHP51688 502 aa14.75□□□□□ -0.05
PCDHGB1-202ENST00000611598 CREMQ03060 361 aa14.75□□□□□ -0.05
PCDHGB1-202ENST00000611598 MAD2L1Q13257 205 aaPredicted RBP14.75□□□□□ -0.05
PCDHGB1-202ENST00000611598 FAM171A1Q5VUB5 890 aa14.75□□□□□ -0.05
PCDHGB1-202ENST00000611598 PTRHD1Q6GMV3 140 aaKnown RBP14.75□□□□□ -0.05
PCDHGB1-202ENST00000611598 DOK6Q6PKX4 331 aa14.75□□□□□ -0.05
PCDHGB1-202ENST00000611598 LINGO4Q6UY18 593 aa14.75□□□□□ -0.05
PCDHGB1-202ENST00000611598 TRIM46Q7Z4K8 759 aa14.75□□□□□ -0.05
PCDHGB1-202ENST00000611598 PDLIM5Q96HC4 596 aaKnown RBP14.75□□□□□ -0.05
PCDHGB1-202ENST00000611598 CTRCQ99895 268 aa14.75□□□□□ -0.05
PCDHGB1-202ENST00000611598 ACPTQ9BZG2 426 aa14.75□□□□□ -0.05
PCDHGB1-202ENST00000611598 MAGEH1Q9H213 219 aa14.75□□□□□ -0.05
PCDHGB1-202ENST00000611598 CRISPLD1Q9H336 500 aa14.75□□□□□ -0.05
PCDHGB1-202ENST00000611598 TRPM7Q96QT4 1865 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 PLXNA4Q9HCM2 1894 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 ERN1O75460 977 aaKnown RBP14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 LRATO95237 230 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 GLUD1P00367 558 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 HOXB9P17482 250 aaPredicted RBP14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 IL1RNP18510 177 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 CXCR4P61073 352 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 LRIF1Q5T3J3 769 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 C6orf183Q5T699 404 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 SVOPQ8N4V2 548 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 POC5Q8NA72 575 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 UROC1Q96N76 676 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 APOL4Q9BPW4 351 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 EHD1Q9H4M9 534 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 IL1RAPQ9NPH3 570 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 TLR8Q9NR97 1041 aaKnown RBP14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 PPT2Q9UMR5 302 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 PRSS21Q9Y6M0 314 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 A0A096LPI6 279 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 H3BNC9 293 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 PSMD11O00231 422 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 OAZ2O95190 189 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 NR4A2P43354 598 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 CDC20Q12834 499 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 DSC3Q14574 896 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 CPSF6Q16630 551 aaKnown RBP eCLIP14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 GNASQ5JWF2 1037 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 TMEM132CQ8N3T6 1108 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 APH1BQ8WW43 257 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 DNASE1L2Q92874 299 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 EFHD2Q96C19 240 aaPredicted RBP14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 FUBP3Q96I24 572 aaKnown RBP eCLIP14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 CD244Q9BZW8 370 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 C6orf62Q9GZU0 229 aaPredicted RBP14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 KCNH6Q9H252 994 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 IL37Q9NZH6 218 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 PCDHB5Q9Y5E4 795 aa14.74□□□□□ -0.05
PCDHGB1-202ENST00000611598 H0Y626 953 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 TRIM16O95361 564 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 DLGAP3O95886 979 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 CTPS1P17812 591 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 GTF2E2P29084 291 aaKnown RBP14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 S100A3P33764 101 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 CLK1P49759 484 aaKnown RBP14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 RPS14P62263 151 aaKnown RBP14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 MVKQ03426 396 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 TWF1Q12792 350 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 NFE2Q16621 373 aaPredicted RBP14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 FAM151BQ6UXP7 276 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 Q6ZPB1 254 aaPredicted RBP14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 SERINC5Q86VE9 423 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 EGLN2Q96KS0 407 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 SIGLEC11Q96RL6 698 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 PARVBQ9HBI1 364 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 CPNE5Q9HCH3 593 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 TM9SF3Q9HD45 589 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 ITM2CQ9NQX7 267 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 KRT84Q9NSB2 600 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 OLA1Q9NTK5 396 aaKnown RBP14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 VPS4AQ9UN37 437 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 OARD1Q9Y530 152 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 WNT9AO14904 365 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 KDELR3O43731 214 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 PGLSO95336 258 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 ALPIP09923 528 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 TCEA1P23193 301 aaKnown RBP14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 C21orf33P30042 268 aaPredicted RBP14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 GJA8P48165 433 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 NEK2P51955 445 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 HNRNPFP52597 415 aaKnown RBP14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 ABHD18Q0P651 414 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 FADDQ13158 208 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 ZNF404Q494X3 552 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 SOWAHCQ53LP3 525 aaPredicted RBP14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 UTS2BQ765I0 119 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 AKAP14Q86UN6 197 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 RASAL3Q86YV0 1011 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 CLIP4Q8N3C7 705 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 ATG16L2Q8NAA4 619 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 ULK4Q96C45 1275 aa14.73□□□□□ -0.05
PCDHGB1-202ENST00000611598 PARK7Q99497 189 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms