RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 SPG21Q9NZD8 308 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 KLHL3Q9UH77 587 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 MCM3APO60318 1980 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 ZNFX1Q9P2E3 1918 aaKnown RBP6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 MROH6A6NGR9 719 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 SLC6A4P31645 630 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 KRT20P35900 424 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 MAPK8P45983 427 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 RFX3P48380 749 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 CLCN2P51788 898 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 TP53BP2Q13625 1128 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 GANABQ14697 944 aaKnown RBP6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 CYBRD1Q53TN4 286 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 DGKKQ5KSL6 1271 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 LYPLAL1Q5VWZ2 237 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 PTCHD4Q6ZW05 846 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 EIF3MQ7L2H7 374 aaKnown RBP6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 EPHX4Q8IUS5 362 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 C11orf65Q8NCR3 313 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 OR5AK3PQ8NH89 298 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 ASZ1Q8WWH4 475 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 TRIB2Q92519 343 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 NACC2Q96BF6 587 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 SLC32A1Q9H598 525 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 MARCH7Q9H992 704 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 ABCB8Q9NUT2 735 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 TOR4AQ9NXH8 423 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 C2orf78A6NCI8 922 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 OPRL1P41146 370 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 OR1E2P47887 323 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 BCAP31P51572 246 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 TMBIM6P55061 237 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 NCS1P62166 190 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 ZXDBP98169 803 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 MXD1Q05195 221 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 C2orf80Q0P641 193 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 NFATC2Q13469 925 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 C1DQ13901 141 aaKnown RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 FRG2Q64ET8 278 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 DEF8Q6ZN54 512 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 DNAJB7Q7Z6W7 309 aaPredicted RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 SLC22A16Q86VW1 577 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 GPR65Q8IYL9 337 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 ADGRG2Q8IZP9 1017 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 UBE2J2Q8N2K1 259 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 FAM86B1Q8N7N1 296 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 ZNF366Q8N895 744 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 WDR36Q8NI36 951 aaKnown RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 NETO1Q8TDF5 533 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 NCSTNQ92542 709 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 HDAC2Q92769 488 aaKnown RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 PPCDCQ96CD2 204 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 FRG2BQ96QU4 278 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 KCNS3Q9BQ31 491 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 INPP5KQ9BT40 448 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 DUSP26Q9BV47 211 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 HERC2P3Q9BVR0 1158 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 DCSTAMPQ9H295 470 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 HMX1Q9NP08 348 aaPredicted RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 CTPS2Q9NRF8 586 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 SLC45A1Q9Y2W3 748 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 Q9Y3F1 56 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 ASB1Q9Y576 335 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 PCDHGA11Q9Y5H2 935 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 PCDHA9Q9Y5H5 950 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 NUP214P35658 2090 aaPredicted RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 SHROOM3Q8TF72 1996 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 LOC110117498-PIK3R3F6TDL0 507 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 SLC1A7O00341 560 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 TPST2O60704 377 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 CAPN15O75808 1086 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 PDYNP01213 254 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 MT-ND2P03891 347 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 SELPP16109 830 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 GGT1P19440 569 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 ALDH3B2P48448 385 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 RAPSNQ13702 412 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 SF1Q15637 639 aaKnown RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 UAP1L1Q3KQV9 507 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 TJAP1Q5JTD0 557 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 ANKRD34AQ69YU3 496 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 Q6ZSR9 355 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 GATAD2AQ86YP4 633 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 CMTM8Q8IZV2 173 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 C1orf52Q8N6N3 182 aaKnown RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 ABHD11Q8NFV4 315 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 KBTBD8Q8NFY9 601 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 OR4K1Q8NGD4 311 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 CSGALNACT1Q8TDX6 532 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 PEX13Q92968 403 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 SCAMP4Q969E2 229 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 HSH2DQ96JZ2 352 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 IL4I1Q96RQ9 567 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 KATNBL1Q9H079 304 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 FAM83DQ9H4H8 585 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 THUMPD1Q9NXG2 353 aaKnown RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 GIN1Q9NXP7 522 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 KIAA1522Q9P206 1035 aaPredicted RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 FZD4Q9ULV1 537 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 PSME4Q14997 1843 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms