RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 RAET1GQ6H3X3 334 aa11.82□□□□□ -0.52
HLA-F-230ENST00000606273 IGFL3Q6UXB1 125 aa11.82□□□□□ -0.52
HLA-F-230ENST00000606273 MED25Q71SY5 747 aa11.82□□□□□ -0.52
HLA-F-230ENST00000606273 TRIM74Q86UV6 250 aa11.82□□□□□ -0.52
HLA-F-230ENST00000606273 CCHCR1Q8TD31 782 aa11.82□□□□□ -0.52
HLA-F-230ENST00000606273 FCRL4Q96PJ5 515 aa11.82□□□□□ -0.52
HLA-F-230ENST00000606273 PPP1R2P1Q96PQ5 205 aa11.82□□□□□ -0.52
HLA-F-230ENST00000606273 KRT12Q99456 494 aa11.82□□□□□ -0.52
HLA-F-230ENST00000606273 ILKAPQ9H0C8 392 aaPredicted RBP11.82□□□□□ -0.52
HLA-F-230ENST00000606273 FAM83DQ9H4H8 585 aa11.82□□□□□ -0.52
HLA-F-230ENST00000606273 IL26Q9NPH9 171 aa11.82□□□□□ -0.52
HLA-F-230ENST00000606273 EIF2B3Q9NR50 452 aaKnown RBP11.82□□□□□ -0.52
HLA-F-230ENST00000606273 C1GALT1Q9NS00 363 aa11.82□□□□□ -0.52
HLA-F-230ENST00000606273 PKD2L2Q9NZM6 624 aa11.82□□□□□ -0.52
HLA-F-230ENST00000606273 CPNE7Q9UBL6 633 aa11.82□□□□□ -0.52
HLA-F-230ENST00000606273 RNF14Q9UBS8 474 aa11.82□□□□□ -0.52
HLA-F-230ENST00000606273 ZC3H7BQ9UGR2 993 aaKnown RBP11.82□□□□□ -0.52
HLA-F-230ENST00000606273 CDC23Q9UJX2 597 aa11.82□□□□□ -0.52
HLA-F-230ENST00000606273 CNOT6Q9ULM6 557 aaKnown RBP11.82□□□□□ -0.52
HLA-F-230ENST00000606273 MED13LQ71F56 2210 aa11.82□□□□□ -0.52
HLA-F-230ENST00000606273 A0A1B0GUH1 482 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 GOLGA6CA6NDK9 693 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 GOLGA6BA6NDN3 693 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 ERI2A8K979 691 aaKnown RBP11.81□□□□□ -0.52
HLA-F-230ENST00000606273 CCDC188H7C350 402 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 AVILO75366 819 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 GOLGA6DP0CG33 693 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 TYRP1P17643 537 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 MAGEA6P43360 314 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 GPR1P46091 355 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 LMAN1P49257 510 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 ZNF140P52738 457 aaPredicted RBP11.81□□□□□ -0.52
HLA-F-230ENST00000606273 KRTAP10-9P60411 292 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 CRADDP78560 199 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 TMPRSS15P98073 1019 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 DR1Q01658 176 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 PTK6Q13882 451 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 TAF1AQ15573 450 aaPredicted RBP11.81□□□□□ -0.52
HLA-F-230ENST00000606273 ZNF648Q5T619 568 aaPredicted RBP11.81□□□□□ -0.52
HLA-F-230ENST00000606273 PPP1R21Q6ZMI0 780 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 ZNF517Q6ZMY9 492 aaPredicted RBP11.81□□□□□ -0.52
HLA-F-230ENST00000606273 ZNF572Q7Z3I7 529 aaPredicted RBP11.81□□□□□ -0.52
HLA-F-230ENST00000606273 GALNT13Q8IUC8 556 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 OR4K2Q8NGD2 314 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 BRSK1Q8TDC3 778 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 ZNF778Q96MU6 729 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 TRIM8Q9BZR9 551 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 TRABDQ9H4I3 376 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 PDE7BQ9NP56 450 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 ARFGAP3Q9NP61 516 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 GOLGA6AQ9NYA3 693 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.81□□□□□ -0.52
HLA-F-230ENST00000606273 HACD3Q9P035 362 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 PCYT1BQ9Y5K3 369 aaPredicted RBP11.81□□□□□ -0.52
HLA-F-230ENST00000606273 SLC30A1Q9Y6M5 507 aa11.81□□□□□ -0.52
HLA-F-230ENST00000606273 TMEM238LA0A1B0GVL6 79 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 LILRA5A6NI73 299 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 GOLGA8MH3BSY2 632 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 TP73O15350 636 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 PRICKLE3O43900 615 aaPredicted RBP11.8□□□□□ -0.52
HLA-F-230ENST00000606273 UGT1A9O60656 530 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 RASSF9O75901 435 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 UBXN7O94888 489 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 GAS8O95995 478 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 PRSS56P0CW18 603 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 F3P13726 295 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 NELFEP18615 380 aaKnown RBP11.8□□□□□ -0.52
HLA-F-230ENST00000606273 UGT1A6P19224 532 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 TPSB2P20231 275 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 UGT1A1P22309 533 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 UGT1A4P22310 534 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 TNNT3P45378 269 aaPredicted RBP11.8□□□□□ -0.52
HLA-F-230ENST00000606273 DCDC1P59894 354 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 XIAPP98170 497 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 CDH17Q12864 832 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 PPP1R7Q15435 360 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 TPSAB1Q15661 275 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 KHDC1Q4VXA5 237 aaKnown RBP11.8□□□□□ -0.52
HLA-F-230ENST00000606273 RNASEH2BQ5TBB1 312 aaKnown RBP11.8□□□□□ -0.52
HLA-F-230ENST00000606273 VWA5B1Q5TIE3 1220 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 CACHD1Q5VU97 1274 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 LYPLAL1Q5VWZ2 237 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 IZUMO3Q5VZ72 239 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 C4orf22Q6V702 233 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 Q6ZS92 163 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 CHST15Q7LFX5 561 aaPredicted RBP11.8□□□□□ -0.52
HLA-F-230ENST00000606273 PRSS42Q7Z5A4 293 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 LINC00523Q86TU6 105 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 CAND1Q86VP6 1230 aaKnown RBP11.8□□□□□ -0.52
HLA-F-230ENST00000606273 FJX1Q86VR8 437 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 MPP5Q8N3R9 675 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 ZBTB2Q8N680 514 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 NAT8LQ8N9F0 302 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 DNAAF3Q8N9W5 541 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 GRK7Q8WTQ7 553 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 COX14Q96I36 57 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 DNAJC1Q96KC8 554 aaKnown RBP11.8□□□□□ -0.52
HLA-F-230ENST00000606273 SRPK1Q96SB4 655 aaKnown RBP11.8□□□□□ -0.52
HLA-F-230ENST00000606273 UCK1Q9HA47 277 aa11.8□□□□□ -0.52
HLA-F-230ENST00000606273 UGT1A7Q9HAW7 530 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms