RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 ACSS2Q9NR19 701 aa17.42■□□□□ 0.38
CCDC12-208ENST00000603885 GPN3Q9UHW5 284 aaPredicted RBP17.42■□□□□ 0.38
CCDC12-208ENST00000603885 TSR3Q9UJK0 312 aaKnown RBP17.42■□□□□ 0.38
CCDC12-208ENST00000603885 MAD1L1Q9Y6D9 718 aa17.42■□□□□ 0.38
CCDC12-208ENST00000603885 MATN4O95460 622 aa17.41■□□□□ 0.38
CCDC12-208ENST00000603885 CTSBP07858 339 aa17.41■□□□□ 0.38
CCDC12-208ENST00000603885 NR1D1P20393 614 aa17.41■□□□□ 0.38
CCDC12-208ENST00000603885 MAGEA3P43357 314 aa17.41■□□□□ 0.38
CCDC12-208ENST00000603885 DCDP81605 110 aaKnown RBP17.41■□□□□ 0.38
CCDC12-208ENST00000603885 CHAF1BQ13112 559 aa17.41■□□□□ 0.38
CCDC12-208ENST00000603885 ZC3H12BQ5HYM0 836 aaKnown RBP17.41■□□□□ 0.38
CCDC12-208ENST00000603885 FAM69BQ5VUD6 431 aa17.41■□□□□ 0.38
CCDC12-208ENST00000603885 FIGLAQ6QHK4 219 aa17.41■□□□□ 0.38
CCDC12-208ENST00000603885 RAB43Q86YS6 212 aa17.41■□□□□ 0.38
CCDC12-208ENST00000603885 MCATQ8IVS2 390 aaKnown RBP17.41■□□□□ 0.38
CCDC12-208ENST00000603885 PPIL6Q8IXY8 311 aa17.41■□□□□ 0.38
CCDC12-208ENST00000603885 NAT8LQ8N9F0 302 aa17.41■□□□□ 0.38
CCDC12-208ENST00000603885 HMGCLL1Q8TB92 370 aa17.41■□□□□ 0.38
CCDC12-208ENST00000603885 DLG3Q92796 817 aa17.41■□□□□ 0.38
CCDC12-208ENST00000603885 GBP5Q96PP8 586 aa17.41■□□□□ 0.38
CCDC12-208ENST00000603885 ING2Q9H160 280 aa17.41■□□□□ 0.38
CCDC12-208ENST00000603885 SPATA7Q9P0W8 599 aa17.41■□□□□ 0.38
CCDC12-208ENST00000603885 DHCR7Q9UBM7 475 aaKnown RBP17.41■□□□□ 0.38
CCDC12-208ENST00000603885 UBR5O95071 2799 aaPredicted RBP17.41■□□□□ 0.38
CCDC12-208ENST00000603885 FER1L5A0AVI2 2057 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 ZCWPW2A0A1B0GU75 182 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 K7EM74 188 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 ZNF185O15231 689 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 PRICKLE3O43900 615 aaPredicted RBP17.4■□□□□ 0.38
CCDC12-208ENST00000603885 USP1O94782 785 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 CD63P08962 238 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 LONRF1Q17RB8 773 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 TTLL9Q3SXZ7 439 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 ACSBG2Q5FVE4 666 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 MLIPQ5VWP3 458 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 FCRL6Q6DN72 434 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 DENND6AQ8IWF6 608 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 LMNTD2Q8IXW0 634 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 TEX19Q8NA77 164 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 CALML6Q8TD86 181 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 DENND1AQ8TEH3 1009 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 ZUFSPQ96AP4 578 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 CCDC68Q9H2F9 335 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 FAM114A2Q9NRY5 505 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 C20orf96Q9NUD7 363 aaPredicted RBP17.4■□□□□ 0.38
CCDC12-208ENST00000603885 IFT80Q9P2H3 777 aaPredicted RBP17.4■□□□□ 0.38
CCDC12-208ENST00000603885 GALPQ9UBC7 116 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 NDOR1Q9UHB4 597 aa17.4■□□□□ 0.38
CCDC12-208ENST00000603885 SETXQ7Z333 2677 aaKnown RBP17.39■□□□□ 0.37
CCDC12-208ENST00000603885 KRT87PA6NCN2 255 aa17.39■□□□□ 0.37
CCDC12-208ENST00000603885 TARM1B6A8C7 271 aa17.39■□□□□ 0.37
CCDC12-208ENST00000603885 TCP1P17987 556 aaKnown RBP17.39■□□□□ 0.37
CCDC12-208ENST00000603885 CCL11P51671 97 aa17.39■□□□□ 0.37
CCDC12-208ENST00000603885 ARSFP54793 590 aa17.39■□□□□ 0.37
CCDC12-208ENST00000603885 CTBP1Q13363 440 aa17.39■□□□□ 0.37
CCDC12-208ENST00000603885 KLHL38Q2WGJ6 581 aa17.39■□□□□ 0.37
CCDC12-208ENST00000603885 NKAIN1Q4KMZ8 207 aa17.39■□□□□ 0.37
CCDC12-208ENST00000603885 RNASEH2BQ5TBB1 312 aaKnown RBP17.39■□□□□ 0.37
CCDC12-208ENST00000603885 AGGF1Q8N302 714 aaeCLIP17.39■□□□□ 0.372e-8■■■■□ 26.2
CCDC12-208ENST00000603885 SIGLEC10Q96LC7 697 aa17.39■□□□□ 0.37
CCDC12-208ENST00000603885 MIPEPQ99797 713 aa17.39■□□□□ 0.37
CCDC12-208ENST00000603885 SLC25A23Q9BV35 468 aa17.39■□□□□ 0.37
CCDC12-208ENST00000603885 FBXO6Q9NRD1 293 aaPredicted RBP17.39■□□□□ 0.37
CCDC12-208ENST00000603885 ASIC3Q9UHC3 531 aa17.39■□□□□ 0.37
CCDC12-208ENST00000603885 PCDHGA9Q9Y5G4 932 aaKnown RBP17.39■□□□□ 0.37
CCDC12-208ENST00000603885 ARHGEF33A8MVX0 844 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 KLF7O75840 302 aaPredicted RBP17.38■□□□□ 0.37
CCDC12-208ENST00000603885 CATP04040 527 aaKnown RBP17.38■□□□□ 0.37
CCDC12-208ENST00000603885 ATXN8OSP0DMR3 200 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 ALAS2P22557 587 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 PSMB5P28074 263 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 OTX2P32243 289 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 FOLR3P41439 243 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 GRIA3P42263 894 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 SLC1A2P43004 574 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 CLCN7P51798 805 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 PGDP52209 483 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 RRADP55042 308 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 SLC9A5Q14940 896 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 NAA25Q14CX7 972 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 CYP2A13Q16696 494 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 TCTE1Q5JU00 501 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 NEK10Q6ZWH5 1172 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 MED25Q71SY5 747 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 TMEM102Q8N9M5 508 aaPredicted RBP17.38■□□□□ 0.37
CCDC12-208ENST00000603885 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.38■□□□□ 0.37
CCDC12-208ENST00000603885 OR2L3Q8NG85 312 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 OR9A1PQ8NGU1 263 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 ANP32BQ92688 251 aaKnown RBP17.38■□□□□ 0.37
CCDC12-208ENST00000603885 KCNJ9Q92806 393 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 IP6K3Q96PC2 410 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 SELENOSQ9BQE4 189 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 FAM167BQ9BTA0 163 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 DDX47Q9H0S4 455 aaKnown RBP17.38■□□□□ 0.37
CCDC12-208ENST00000603885 KLHL42Q9P2K6 505 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 G3BP2Q9UN86 482 aaKnown RBP17.38■□□□□ 0.37
CCDC12-208ENST00000603885 PTRH2Q9Y3E5 179 aaKnown RBP17.38■□□□□ 0.37
CCDC12-208ENST00000603885 KLK4Q9Y5K2 254 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 COMMD10Q9Y6G5 202 aa17.38■□□□□ 0.37
CCDC12-208ENST00000603885 MED13Q9UHV7 2174 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms