RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 LINGO4Q6UY18 593 aa9.42□□□□□ -0.9
CSMD1-217ENST00000602723 CYP2U1Q7Z449 544 aa9.42□□□□□ -0.9
CSMD1-217ENST00000602723 SLC22A16Q86VW1 577 aa9.42□□□□□ -0.9
CSMD1-217ENST00000602723 C9orf43Q8TAL5 461 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-217ENST00000602723 HMX1Q9NP08 348 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-217ENST00000602723 NR2E1Q9Y466 385 aa9.42□□□□□ -0.9
CSMD1-217ENST00000602723 PTPRJQ12913 1337 aa9.42□□□□□ -0.9
CSMD1-217ENST00000602723 C1QTNF8P60827 252 aa9.42□□□□□ -0.9
CSMD1-217ENST00000602723 ERVK-8P63133 956 aa9.42□□□□□ -0.9
CSMD1-217ENST00000602723 PUM1Q14671 1186 aaKnown RBP eCLIP9.42□□□□□ -0.9
CSMD1-217ENST00000602723 VSTM1Q6UX27 236 aa9.42□□□□□ -0.9
CSMD1-217ENST00000602723 C1orf216Q8TAB5 229 aa9.42□□□□□ -0.9
CSMD1-217ENST00000602723 SCGB3A2Q96PL1 93 aa9.42□□□□□ -0.9
CSMD1-217ENST00000602723 C14orf166Q9Y224 244 aaKnown RBP9.42□□□□□ -0.9
CSMD1-217ENST00000602723 HEBP2Q9Y5Z4 205 aa9.42□□□□□ -0.9
CSMD1-217ENST00000602723 PARP4Q9UKK3 1724 aaKnown RBP9.42□□□□□ -0.9
CSMD1-217ENST00000602723 LOC100509620A0A075B734 347 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 ISPDA4D126 451 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 CDK14O94921 469 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 CCR8P51685 355 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 TMEM139Q8IV31 216 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 OSBPL7Q9BZF2 842 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 HCN3Q9P1Z3 774 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 POFUT2Q9Y2G5 429 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 KCNIP3Q9Y2W7 256 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 RBM47A0AV96 593 aaKnown RBP9.41□□□□□ -0.9
CSMD1-217ENST00000602723 TTC34A8MYJ7 566 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 YIPF7Q8N8F6 280 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 SLC16A10Q8TF71 515 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 C10orf82Q8WW14 230 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 SCN3AQ9NY46 2000 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 ADM5C9JUS6 153 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 VIPP01282 170 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 EPCAMP16422 314 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 GRM5P41594 1212 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 MECP2P51608 486 aaKnown RBP9.41□□□□□ -0.9
CSMD1-217ENST00000602723 CLCN4P51793 760 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 DAG1Q14118 895 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 PRPF38BQ5VTL8 546 aaKnown RBP9.41□□□□□ -0.9
CSMD1-217ENST00000602723 ALG1LQ6GMV1 187 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 FOXRED2Q8IWF2 684 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 OR10G2Q8NGC3 310 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 PCDH19Q8TAB3 1148 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 BPIFB1Q8TDL5 484 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 INSIG1O15503 277 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 MSCO60682 206 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 OR4F21O95013 312 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 GLUD1P00367 558 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 GNAO1P09471 354 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 GLDCP23378 1020 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 LCN1P31025 176 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 FSTL5Q8N475 847 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-217ENST00000602723 PACRGLQ8N7B6 248 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 TMEM203Q969S6 136 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 HMCESQ96FZ2 354 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 DUSP26Q9BV47 211 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 RNF208Q9H0X6 261 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 DNAJB4Q9UDY4 337 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 RUVBL1Q9Y265 456 aaKnown RBP9.41□□□□□ -0.9
CSMD1-217ENST00000602723 TMEM131LA2VDJ0 1609 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 ITGA10O75578 1167 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 RNASEH2AO75792 299 aaKnown RBP9.41□□□□□ -0.9
CSMD1-217ENST00000602723 PVALBP20472 110 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-217ENST00000602723 PTGER3P43115 390 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 PDE12Q6L8Q7 609 aaKnown RBP9.41□□□□□ -0.9
CSMD1-217ENST00000602723 STOML3Q8TAV4 291 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 AZIN2Q96A70 460 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 MIPEPQ99797 713 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 PEAK1Q9H792 1746 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 ELOA3DA6NLF2 546 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-217ENST00000602723 TGFB1I1O43294 461 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 FKBP1AP62942 108 aaKnown RBP9.41□□□□□ -0.9
CSMD1-217ENST00000602723 IRF9Q00978 393 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 TAF1AQ15573 450 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-217ENST00000602723 ELOA3BQ3SY89 546 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 NADK2Q4G0N4 442 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 ALG10Q5BKT4 473 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 CATSPERGQ6ZRH7 1159 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 ZNF676Q8N7Q3 588 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 ELOA3Q8NG57 546 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 TBX5Q99593 518 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 LRRC72A6NJI9 287 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 IFNA21P01568 189 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 ESR1P03372 595 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 FOXN2P32314 431 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 SERPINA9Q86WD7 417 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 CHERPQ8IWX8 916 aaKnown RBP9.41□□□□□ -0.9
CSMD1-217ENST00000602723 CPA6Q8N4T0 437 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 FIBCD1Q8N539 461 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 OR5J2Q8NH18 312 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 LRRC58Q96CX6 371 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 PURBQ96QR8 312 aaKnown RBP9.41□□□□□ -0.9
CSMD1-217ENST00000602723 PTPN18Q99952 460 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 LPIN3Q9BQK8 851 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 DPAGT1Q9H3H5 408 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 ANKHQ9HCJ1 492 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 ARFRP1Q13795 201 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 HID1Q8IV36 788 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 CMTR2Q8IYT2 770 aaKnown RBP9.41□□□□□ -0.9
CSMD1-217ENST00000602723 YTHDF1Q9BYJ9 559 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms