RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 RHBDF1Q96CC6 855 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 LRIG1Q96JA1 1093 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 SFXN2Q96NB2 322 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 P2RY13Q9BPV8 354 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 FAM83CQ9BQN1 747 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 ADPGKQ9BRR6 497 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 LXNQ9BS40 222 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 DDX31Q9H8H2 851 aaKnown RBP8.68□□□□□ -1.02
COMMD3-215ENST00000602574 MAB21L2Q9Y586 359 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 U3KQV3 271 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 TP53BP1Q12888 1972 aaPredicted RBP8.67□□□□□ -1.02
COMMD3-215ENST00000602574 A0A1W2PPC1 479 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 TXNL1O43396 289 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 SNAPC5O75971 98 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 PLATP00750 562 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 APRTP07741 180 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 USP17L7P0C7H9 530 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 DPEP1P16444 411 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 IGFBP5P24593 272 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 MYL9P24844 172 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 GTF2E2P29084 291 aaKnown RBP8.67□□□□□ -1.02
COMMD3-215ENST00000602574 BRCC3P46736 316 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 PKNOX1P55347 436 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 SNRPD2P62316 118 aaKnown RBP8.67□□□□□ -1.02
COMMD3-215ENST00000602574 MS4A2Q01362 244 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 TROAPQ12815 778 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 ECH1Q13011 328 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 TRAF3Q13114 568 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 PEX6Q13608 980 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 EXOSC2Q13868 293 aaKnown RBP8.67□□□□□ -1.02
COMMD3-215ENST00000602574 TOMM34Q15785 309 aaPredicted RBP8.67□□□□□ -1.02
COMMD3-215ENST00000602574 ECM1Q16610 540 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 AOC3Q16853 763 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 PRR5LQ6MZQ0 368 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 MSANTD2Q6P1R3 559 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 FAM92BQ6ZTR7 304 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 ZNF571Q7Z3V5 609 aaPredicted RBP8.67□□□□□ -1.02
COMMD3-215ENST00000602574 NECAB2Q7Z6G3 386 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 ZC3HC1Q86WB0 502 aaKnown RBP8.67□□□□□ -1.02
COMMD3-215ENST00000602574 SKA3Q8IX90 412 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 ZDHHC14Q8IZN3 488 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 OR8J2Q8NGG1 315 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 GATAD2BQ8WXI9 593 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 TCEAL4Q96EI5 215 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 BARD1Q99728 777 aaKnown RBP8.67□□□□□ -1.02
COMMD3-215ENST00000602574 EIF2AK1Q9BQI3 630 aaKnown RBP8.67□□□□□ -1.02
COMMD3-215ENST00000602574 TINF2Q9BSI4 451 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 INPP5KQ9BT40 448 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 PPIL3Q9H2H8 161 aaKnown RBP8.67□□□□□ -1.02
COMMD3-215ENST00000602574 SEMA6CQ9H3T2 930 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 ARMT1Q9H993 441 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 KCNK12Q9HB15 430 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 IMP3Q9NV31 184 aaKnown RBP8.67□□□□□ -1.02
COMMD3-215ENST00000602574 SMPD3Q9NY59 655 aaPredicted RBP8.67□□□□□ -1.02
COMMD3-215ENST00000602574 SLC6A5Q9Y345 797 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 CNTNAP4Q9C0A0 1308 aa8.67□□□□□ -1.02
COMMD3-215ENST00000602574 A0A0G2JLW4 131 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 GNG14A0A1W2PPG7 69 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 KLRG2A4D1S0 409 aaPredicted RBP8.66□□□□□ -1.02
COMMD3-215ENST00000602574 CCDC154A6NI56 674 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 TMEM189-UBE2V1I3L0A0 370 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 AIPO00170 330 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 MEIS1O00470 390 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 MATN3O15232 486 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 PSMD3O43242 534 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 SEC14L5O43304 696 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 NOBOXO60393 691 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 CRCPO75575 148 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 CREG1O75629 220 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 PIAS2O75928 621 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 DDAH1O94760 285 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 NUDT7P0C024 238 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 ARSBP15848 533 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 PCMT1P22061 227 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 XPAP23025 273 aaPredicted RBP8.66□□□□□ -1.02
COMMD3-215ENST00000602574 RFC2P35250 354 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 PIK3CBP42338 1070 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 NUDT6P53370 316 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 MAZP56270 477 aaKnown RBP8.66□□□□□ -1.02
COMMD3-215ENST00000602574 PDIA2Q13087 525 aaKnown RBP8.66□□□□□ -1.02
COMMD3-215ENST00000602574 CEACAM7Q14002 265 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 BAATQ14032 418 aaPredicted RBP8.66□□□□□ -1.02
COMMD3-215ENST00000602574 CHRNA6Q15825 494 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 TMEM236Q5W0B7 351 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 C17orf107Q6ZR85 190 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 PLD3Q8IV08 490 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 GID4Q8IVV7 300 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 STPG2Q8N412 459 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 SPATA6LQ8N4H0 392 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 AMER2Q8N7J2 671 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 ITFG1Q8TB96 612 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 NSUN6Q8TEA1 469 aaKnown RBP8.66□□□□□ -1.02
COMMD3-215ENST00000602574 CPA5Q8WXQ8 436 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 STAMQ92783 540 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 HDAC10Q969S8 669 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 NARS2Q96I59 477 aaKnown RBP8.66□□□□□ -1.02
COMMD3-215ENST00000602574 ZNF845Q96IR2 970 aaPredicted RBP8.66□□□□□ -1.02
COMMD3-215ENST00000602574 SLC45A3Q96JT2 553 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 PPP1R16BQ96T49 567 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 FAM49AQ9H0Q0 323 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms