RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 UBE2R2Q712K3 238 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-225ENST00000600733 RNF175Q8N4F7 328 aa19.7■□□□□ 0.74
SHKBP1-225ENST00000600733 APIPQ96GX9 242 aa19.7■□□□□ 0.74
SHKBP1-225ENST00000600733 CCDC90BQ9GZT6 254 aa19.7■□□□□ 0.74
SHKBP1-225ENST00000600733 AP3M1Q9Y2T2 418 aa19.7■□□□□ 0.74
SHKBP1-225ENST00000600733 PLXNB3Q9ULL4 1909 aa19.7■□□□□ 0.74
SHKBP1-225ENST00000600733 AGAP14A8MT82 685 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 XPNPEP2O43895 674 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 RECQL5O94762 991 aaPredicted RBP19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 INMTO95050 263 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 LATS1O95835 1130 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 CD70P32970 193 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 PSMD7P51665 324 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 LMAN2Q12907 356 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 SPCS2Q15005 226 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 DOK6Q6PKX4 331 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 FKBP9P1Q75LS8 142 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 MUL1Q969V5 352 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 RMND5AQ9H871 391 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 BAG5Q9UL15 447 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 DGKBQ9Y6T7 804 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 KCNE1BA0A087WTH5 132 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 AXIN1O15169 862 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 ZNF682O95780 498 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 SERPINA4P29622 427 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 STK19P49842 368 aaPredicted RBP19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 RAPSNQ13702 412 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 LRRC73Q5JTD7 316 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 LDLRAP1Q5SW96 308 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 NEK5Q6P3R8 708 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 SLC16A12Q6ZSM3 486 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 GALNT10Q86SR1 603 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 VRK3Q8IV63 474 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 CBARPQ8N350 705 aaPredicted RBP19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 BEND7Q8N7W2 519 aaPredicted RBP19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 DDHD1Q8NEL9 900 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 VOPP1Q96AW1 172 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 ASIC4Q96FT7 647 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 REXO5Q96IC2 774 aaKnown RBP19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 APOLD1Q96LR9 279 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 NODALQ96S42 347 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 COPS8Q99627 209 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 TBCCD1Q9NVR7 557 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 ZDHHC3Q9NYG2 299 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 AASSQ9UDR5 926 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 ABCG2Q9UNQ0 655 aa19.69■□□□□ 0.74
SHKBP1-225ENST00000600733 RFXANKO14593 260 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 BCKDKO14874 412 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 MAN1A2O60476 641 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 CLPXO76031 633 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 IGSF6O95976 241 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 FTH1P02794 183 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 CTSOP43234 321 aaPredicted RBP19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 PTCHD3Q3KNS1 767 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 CARD16Q5EG05 197 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 CPZQ66K79 652 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 OR4F3Q6IEY1 312 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 CRTC3Q6UUV7 619 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 CYP4Z1Q86W10 505 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 ZDHHC21Q8IVQ6 265 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 RAD21L1Q9H4I0 556 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 ORC6Q9Y5N6 252 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 SNX5Q9Y5X3 404 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 WNT9AO14904 365 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 PRAMEF4O60810 478 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 BCAS1O75363 584 aaPredicted RBP19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 CBSLP0DN79 551 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 CYP4B1P13584 511 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 PCMT1P22061 227 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 CBSP35520 551 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 MAPK8P45983 427 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 GP2P55259 537 aaKnown RBP19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 IL5RAQ01344 420 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 ABHD18Q0P651 414 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 PRAMEF9Q5VWM5 478 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 CEP68Q76N32 757 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 HIPK1Q86Z02 1210 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 DNAJB8Q8NHS0 232 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 RAET1EQ8TD07 263 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 AUTS2Q8WXX7 1259 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 EBPLQ9BY08 206 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 INTS6Q9UL03 887 aaKnown RBP19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 SNX6Q9UNH7 406 aa19.68■□□□□ 0.74
SHKBP1-225ENST00000600733 UPK3BL1B0FP48 263 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 UPK3BL2E5RIL1 263 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 SLC16A6O15403 523 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 PRPS2P11908 318 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 LHCGRP22888 699 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 FSHRP23945 695 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 IGFBP5P24593 272 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 PPP3CCP48454 512 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 RAD23AP54725 363 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 CCL23P55773 120 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 IL1RL1Q01638 556 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 PTSQ03393 145 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 CDK5R2Q13319 367 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 TPGS2Q68CL5 300 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 BBS7Q8IWZ6 715 aa19.67■□□□□ 0.74
SHKBP1-225ENST00000600733 OR2AP1Q8NGE2 309 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms