RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 SVOPQ8N4V2 548 aa17.91■□□□□ 0.46
UPF1-210ENST00000600689 OR8J3Q8NGG0 315 aa17.91■□□□□ 0.46
UPF1-210ENST00000600689 PHF10Q8WUB8 498 aaKnown RBP17.91■□□□□ 0.46
UPF1-210ENST00000600689 ULK4Q96C45 1275 aa17.91■□□□□ 0.46
UPF1-210ENST00000600689 PYURFQ96I23 114 aa17.91■□□□□ 0.46
UPF1-210ENST00000600689 RDH12Q96NR8 316 aa17.91■□□□□ 0.46
UPF1-210ENST00000600689 SERPINB11Q96P15 392 aa17.91■□□□□ 0.46
UPF1-210ENST00000600689 IFT52Q9Y366 437 aa17.91■□□□□ 0.46
UPF1-210ENST00000600689 UGT2A1Q9Y4X1 527 aa17.91■□□□□ 0.46
UPF1-210ENST00000600689 A0A0U1RQF3 1178 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 NDST3O95803 873 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 SLC10A3P09131 477 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 RHOQP17081 205 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 HLA-DPA1P20036 260 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 S100A5P33763 92 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 GRK5P34947 590 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 ZXDBP98169 803 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 C10orf120Q5SQS8 335 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 MFSD14CQ5VZR4 134 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 USP43Q70EL4 1123 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 OR8H2Q8N162 312 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 SETD9Q8NE22 299 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 DNASE1L2Q92874 299 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 ZNF382Q96SR6 550 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 ACBD6Q9BR61 282 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 HEBP1Q9NRV9 189 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 ILVBLA1L0T0 632 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 STX16O14662 325 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 SEPT4O43236 478 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 OGNP20774 298 aaKnown RBP17.9■□□□□ 0.46
UPF1-210ENST00000600689 HNRNPFP52597 415 aaKnown RBP17.9■□□□□ 0.46
UPF1-210ENST00000600689 PHC1P78364 1004 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 ATP6V0D2Q8N8Y2 350 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 NACA2Q9H009 215 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 C1orf109Q9NX04 203 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 PCDHGA12O60330 932 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 BMP1P13497 986 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 MZF1P28698 734 aaPredicted RBP17.9■□□□□ 0.46
UPF1-210ENST00000600689 RYKP34925 604 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 FXNQ16595 210 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 SYT6Q5T7P8 510 aaPredicted RBP17.9■□□□□ 0.46
UPF1-210ENST00000600689 CCDC71Q8IV32 467 aaPredicted RBP17.9■□□□□ 0.46
UPF1-210ENST00000600689 PARP16Q8N5Y8 322 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 EGLN2Q96KS0 407 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 BEX2Q9BXY8 128 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 TBC1D14Q9P2M4 693 aa17.9■□□□□ 0.46
UPF1-210ENST00000600689 KRT87PA6NCN2 255 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 ARNTLO00327 626 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 SCELO95171 688 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 GLUD1P00367 558 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 CYP2U1Q7Z449 544 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 MMAAQ8IVH4 418 aaKnown RBP17.89■□□□□ 0.45
UPF1-210ENST00000600689 RGL4Q8IZJ4 473 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 RNF175Q8N4F7 328 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 OR52J3Q8NH60 311 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 ZFYVE19Q96K21 471 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 PKMYT1Q99640 499 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 COPS4Q9BT78 406 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 DUSP21Q9H596 190 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 ADPRHL2Q9NX46 363 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 SIRT5Q9NXA8 310 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 WWOXQ9NZC7 414 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 GPRC5BQ9NZH0 403 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 AGAP5A6NIR3 686 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 PDZK1P1A8MUH7 402 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 STX7O15400 261 aaKnown RBP17.89■□□□□ 0.45
UPF1-210ENST00000600689 RGS5O15539 181 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 VLDLRP98155 873 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 SEMG2Q02383 582 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 GDPD3Q7L5L3 318 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 ZNF280BQ86YH2 543 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 UBE2J2Q8N2K1 259 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 EFHD2Q96C19 240 aaPredicted RBP17.89■□□□□ 0.45
UPF1-210ENST00000600689 APOL4Q9BPW4 351 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 EMILIN2Q9BXX0 1053 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 TNKS2Q9H2K2 1166 aa17.89■□□□□ 0.45
UPF1-210ENST00000600689 THG1LQ9NWX6 298 aaKnown RBP17.89■□□□□ 0.45
UPF1-210ENST00000600689 AREL1O15033 823 aa17.88■□□□□ 0.45
UPF1-210ENST00000600689 SLC16A6O15403 523 aa17.88■□□□□ 0.45
UPF1-210ENST00000600689 DYRK3O43781 588 aa17.88■□□□□ 0.45
UPF1-210ENST00000600689 CTPS1P17812 591 aa17.88■□□□□ 0.45
UPF1-210ENST00000600689 TACR1P25103 407 aa17.88■□□□□ 0.45
UPF1-210ENST00000600689 TGFBR2P37173 567 aa17.88■□□□□ 0.45
UPF1-210ENST00000600689 RPP38P78345 283 aaKnown RBP17.88■□□□□ 0.45
UPF1-210ENST00000600689 ZNF648Q5T619 568 aaPredicted RBP17.88■□□□□ 0.45
UPF1-210ENST00000600689 CACHD1Q5VU97 1274 aa17.88■□□□□ 0.45
UPF1-210ENST00000600689 PDE12Q6L8Q7 609 aaKnown RBP17.88■□□□□ 0.45
UPF1-210ENST00000600689 LINGO4Q6UY18 593 aa17.88■□□□□ 0.45
UPF1-210ENST00000600689 RERGLQ9H628 205 aa17.88■□□□□ 0.45
UPF1-210ENST00000600689 PARVBQ9HBI1 364 aa17.88■□□□□ 0.45
UPF1-210ENST00000600689 NOD1Q9Y239 953 aa17.88■□□□□ 0.45
UPF1-210ENST00000600689 RNF6Q9Y252 685 aa17.88■□□□□ 0.45
UPF1-210ENST00000600689 DLGAP4Q9Y2H0 992 aa17.88■□□□□ 0.45
UPF1-210ENST00000600689 NAALAD2Q9Y3Q0 740 aa17.88■□□□□ 0.45
UPF1-210ENST00000600689 TESMINQ9Y4I5 508 aa17.88■□□□□ 0.45
UPF1-210ENST00000600689 DYTNA2CJ06 578 aa17.88■□□□□ 0.45
UPF1-210ENST00000600689 ZNF623O75123 536 aa17.88■□□□□ 0.45
UPF1-210ENST00000600689 ULK1O75385 1050 aa17.88■□□□□ 0.45
UPF1-210ENST00000600689 NPPAP01160 153 aa17.88■□□□□ 0.45
UPF1-210ENST00000600689 EIF4EBP2Q13542 120 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms