RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 PGGT1BP53609 377 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 GFERP55789 205 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 HSD11B2P80365 405 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 ABATP80404 500 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 TGFBIQ15582 683 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 TSNQ15631 228 aaKnown RBP16■□□□□ 0.15
SHKBP1-219ENST00000599575 AGTRAPQ6RW13 159 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 RAB11FIP2Q7L804 512 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 B3GNT8Q7Z7M8 397 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 ISCA2Q86U28 154 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 BPHLQ86WA6 291 aaPredicted RBP16■□□□□ 0.15
SHKBP1-219ENST00000599575 GPSM1Q86YR5 675 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 CENPLQ8N0S6 344 aaPredicted RBP16■□□□□ 0.15
SHKBP1-219ENST00000599575 IQCKQ8N0W5 287 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 JPH3Q8WXH2 748 aaPredicted RBP16■□□□□ 0.15
SHKBP1-219ENST00000599575 ZUFSPQ96AP4 578 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 OR2A14Q96R47 310 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 SCNM1Q9BWG6 230 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 VPS11Q9H270 941 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 CNOT10Q9H9A5 744 aaKnown RBP16■□□□□ 0.15
SHKBP1-219ENST00000599575 IGSF5Q9NSI5 407 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 UTP6Q9NYH9 597 aaKnown RBP16■□□□□ 0.15
SHKBP1-219ENST00000599575 STOX2Q9P2F5 926 aaPredicted RBP16■□□□□ 0.15
SHKBP1-219ENST00000599575 LGALS13Q9UHV8 139 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 ANGPTL2Q9UKU9 493 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 TMCO1Q9UM00 188 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 PLAGL1Q9UM63 463 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 BTRCQ9Y297 605 aa16■□□□□ 0.15
SHKBP1-219ENST00000599575 A0A0J9YY10 115 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 NPEPPSL1A6NEC2 478 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 TARM1B6A8C7 271 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 PLD2O14939 933 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 UGT2B7P16662 529 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 KRT15P19012 456 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 TFEBP19484 476 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 CDH3P22223 829 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 RPA3P35244 121 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 ARL4DP49703 201 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 RAB15P59190 212 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 RELAQ04206 551 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 CAMK2BQ13554 666 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 RTP5Q14D33 572 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 SF1Q15637 639 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 BEND6Q5SZJ8 279 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 TMTC4Q5T4D3 741 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 CAPN13Q6MZZ7 669 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 METTL2BQ6P1Q9 378 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 LRIG3Q6UXM1 1119 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 FAM92BQ6ZTR7 304 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 CLEC14AQ86T13 490 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 LRRC56Q8IYG6 542 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 OR2A1Q8NGT9 310 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 FLVCR1-AS1Q8TAF5 88 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 MZB1Q8WU39 189 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 TCTN2Q96GX1 697 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 IL17FQ96PD4 163 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 MAP3K3Q99759 626 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 MIPEPQ99797 713 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 POLR1BQ9H9Y6 1135 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 CCDC177Q9NQR7 707 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 TMEM9Q9P0T7 183 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 ANKMY1Q9P2S6 941 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 DCDC2Q9UHG0 476 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 RNF112Q9ULX5 631 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 PLAAQ9Y263 795 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 CEP295Q9C0D2 2601 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 SPTBN2O15020 2390 aa15.99■□□□□ 0.15
SHKBP1-219ENST00000599575 SPEGQ15772 3267 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 CASC3O15234 703 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 DXOO77932 396 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 S100BP04271 92 aaPredicted RBP15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 CMPK1P30085 196 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 GGT5P36269 586 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 ACY1Q03154 408 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 PRDX1Q06830 199 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 IL11RAQ14626 422 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 SULT1C3Q6IMI6 304 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 D2HGDHQ8N465 521 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 FBXO39Q8N4B4 442 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 PDPRQ8NCN5 879 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 OR8K5Q8NH50 307 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 OR56A3Q8NH54 315 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 EPS8L3Q8TE67 593 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 KCTD4Q8WVF5 259 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 NXNL1Q96CM4 212 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 NXPE2Q96DL1 559 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 GPR78Q96P69 363 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 EGFL8Q99944 293 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 ZPBPQ9BS86 351 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 HAUS8Q9BT25 410 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 SGPP1Q9BX95 441 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 ASPSCR1Q9BZE9 553 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 PDE7BQ9NP56 450 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 FBXO8Q9NRD0 319 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 SPHK1Q9NYA1 384 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 NUDT4Q9NZJ9 180 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 SENP1Q9P0U3 644 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 KLHL3Q9UH77 587 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 TBK1Q9UHD2 729 aa15.98■□□□□ 0.15
SHKBP1-219ENST00000599575 LOXL2Q9Y4K0 774 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms