RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.62■■□□□ 1.21
SYMPK-212ENST00000598896 PHACTR4Q8IZ21 702 aa22.62■■□□□ 1.21
SYMPK-212ENST00000598896 RGL4Q8IZJ4 473 aa22.62■■□□□ 1.21
SYMPK-212ENST00000598896 C2orf73Q8N5S3 287 aaPredicted RBP22.62■■□□□ 1.21
SYMPK-212ENST00000598896 TRPS1Q9UHF7 1281 aa22.62■■□□□ 1.21
SYMPK-212ENST00000598896 KNL1Q8NG31 2342 aa22.62■■□□□ 1.21
SYMPK-212ENST00000598896 TLR4O00206 839 aa22.61■■□□□ 1.21
SYMPK-212ENST00000598896 TSTA3Q13630 321 aaPredicted RBP22.61■■□□□ 1.21
SYMPK-212ENST00000598896 UBAP2LQ14157 1087 aaKnown RBP22.61■■□□□ 1.21
SYMPK-212ENST00000598896 GALNTL6Q49A17 601 aa22.61■■□□□ 1.21
SYMPK-212ENST00000598896 NXNQ6DKJ4 435 aa22.61■■□□□ 1.21
SYMPK-212ENST00000598896 CAPN13Q6MZZ7 669 aaPredicted RBP22.61■■□□□ 1.21
SYMPK-212ENST00000598896 WDR5BQ86VZ2 330 aa22.61■■□□□ 1.21
SYMPK-212ENST00000598896 C1orf210Q8IVY1 113 aa22.61■■□□□ 1.21
SYMPK-212ENST00000598896 HBEGFQ99075 208 aa22.61■■□□□ 1.21
SYMPK-212ENST00000598896 CCDC28BQ9BUN5 200 aa22.61■■□□□ 1.21
SYMPK-212ENST00000598896 SAR1AQ9NR31 198 aa22.61■■□□□ 1.21
SYMPK-212ENST00000598896 ZNF624Q9P2J8 865 aaPredicted RBP22.61■■□□□ 1.21
SYMPK-212ENST00000598896 SH2B3Q9UQQ2 575 aa22.61■■□□□ 1.21
SYMPK-212ENST00000598896 TDRD6O60522 2096 aaKnown RBP22.6■■□□□ 1.21
SYMPK-212ENST00000598896 ARHGEF17Q96PE2 2063 aaPredicted RBP22.6■■□□□ 1.21
SYMPK-212ENST00000598896 FFAR3O14843 346 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 GPR42O15529 346 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 CLDN9O95484 217 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 HALP42357 657 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 CCDC121Q6ZUS5 278 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 YTHDF3Q7Z739 585 aaKnown RBP22.6■■□□□ 1.21
SYMPK-212ENST00000598896 DCP2Q8IU60 420 aaKnown RBP22.6■■□□□ 1.21
SYMPK-212ENST00000598896 CAMK1GQ96NX5 476 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 GIMAP2Q9UG22 337 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 POLG2Q9UHN1 485 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 SPAG17Q6Q759 2223 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 KCNE1BA0A087WTH5 132 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 CCDC22O60826 627 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 WFS1O76024 890 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 F3P13726 295 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 NPPBP16860 134 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 CD22P20273 847 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 CHIT1Q13231 466 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 ARHGAP19Q14CB8 494 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 CYP2A13Q16696 494 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 XKR7Q5GH72 579 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 LARP4Q71RC2 724 aaKnown RBP eCLIP22.6■■□□□ 1.21
SYMPK-212ENST00000598896 L3MBTL4Q8NA19 623 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 CEP70Q8NHQ1 597 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 ACTRT2Q8TDY3 377 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 NEIL2Q969S2 332 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 LRRC61Q9BV99 259 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 MVB12BQ9H7P6 319 aa22.6■■□□□ 1.21
SYMPK-212ENST00000598896 CCDC177Q9NQR7 707 aaPredicted RBP22.6■■□□□ 1.21
SYMPK-212ENST00000598896 FARSBQ9NSD9 589 aaKnown RBP22.6■■□□□ 1.21
SYMPK-212ENST00000598896 APOBEC3BQ9UH17 382 aaKnown RBP22.6■■□□□ 1.21
SYMPK-212ENST00000598896 LAMA1P25391 3075 aa22.59■■□□□ 1.21
SYMPK-212ENST00000598896 CHEK2O96017 543 aa22.59■■□□□ 1.21
SYMPK-212ENST00000598896 JUNDP17535 347 aa22.59■■□□□ 1.21
SYMPK-212ENST00000598896 NCF2P19878 526 aaPredicted RBP22.59■■□□□ 1.21
SYMPK-212ENST00000598896 HMOX2P30519 316 aa22.59■■□□□ 1.21
SYMPK-212ENST00000598896 HNRNPH2P55795 449 aaKnown RBP22.59■■□□□ 1.21
SYMPK-212ENST00000598896 CSTF1Q05048 431 aaKnown RBP22.59■■□□□ 1.21
SYMPK-212ENST00000598896 C1orf61Q13536 156 aa22.59■■□□□ 1.21
SYMPK-212ENST00000598896 ABRAXAS2Q15018 415 aa22.59■■□□□ 1.21
SYMPK-212ENST00000598896 CPSF6Q16630 551 aaKnown RBP eCLIP22.59■■□□□ 1.21
SYMPK-212ENST00000598896 GGTA1PQ4G0N0 100 aa22.59■■□□□ 1.21
SYMPK-212ENST00000598896 METTL21CQ5VZV1 264 aa22.59■■□□□ 1.21
SYMPK-212ENST00000598896 LINC01555Q8NAE3 123 aa22.59■■□□□ 1.21
SYMPK-212ENST00000598896 OR52E1Q8NGJ3 308 aa22.59■■□□□ 1.21
SYMPK-212ENST00000598896 OR2T11Q8NH01 316 aa22.59■■□□□ 1.21
SYMPK-212ENST00000598896 GSDMCQ9BYG8 508 aa22.59■■□□□ 1.21
SYMPK-212ENST00000598896 SPATA7Q9P0W8 599 aa22.59■■□□□ 1.21
SYMPK-212ENST00000598896 TAAR2Q9P1P5 351 aa22.59■■□□□ 1.21
SYMPK-212ENST00000598896 LNPEPQ9UIQ6 1025 aa22.59■■□□□ 1.21
SYMPK-212ENST00000598896 TRBV23OR9-2A0A075B6M9 112 aa22.58■■□□□ 1.21
SYMPK-212ENST00000598896 CSNK1EP49674 416 aaKnown RBP22.58■■□□□ 1.21
SYMPK-212ENST00000598896 KRT33BQ14525 404 aa22.58■■□□□ 1.21
SYMPK-212ENST00000598896 PRRT3Q5FWE3 981 aa22.58■■□□□ 1.21
SYMPK-212ENST00000598896 LPCAT2Q7L5N7 544 aa22.58■■□□□ 1.21
SYMPK-212ENST00000598896 EFL1Q7Z2Z2 1120 aaKnown RBP22.58■■□□□ 1.21
SYMPK-212ENST00000598896 LONP2Q86WA8 852 aa22.58■■□□□ 1.21
SYMPK-212ENST00000598896 TREML1Q86YW5 311 aa22.58■■□□□ 1.21
SYMPK-212ENST00000598896 SFTPA2Q8IWL1 248 aa22.58■■□□□ 1.21
SYMPK-212ENST00000598896 GBP7Q8N8V2 638 aaPredicted RBP22.58■■□□□ 1.21
SYMPK-212ENST00000598896 MARK4Q96L34 752 aa22.58■■□□□ 1.21
SYMPK-212ENST00000598896 CCDC106Q9BWC9 280 aa22.58■■□□□ 1.21
SYMPK-212ENST00000598896 XKR8Q9H6D3 395 aa22.58■■□□□ 1.21
SYMPK-212ENST00000598896 AKTIPQ9H8T0 292 aa22.58■■□□□ 1.21
SYMPK-212ENST00000598896 TP53BP1Q12888 1972 aaPredicted RBP22.58■■□□□ 1.21
SYMPK-212ENST00000598896 ATXN2Q99700 1313 aaKnown RBP22.58■■□□□ 1.21
SYMPK-212ENST00000598896 CSF2P04141 144 aa22.58■■□□□ 1.2
SYMPK-212ENST00000598896 CTSEP14091 401 aa22.58■■□□□ 1.2
SYMPK-212ENST00000598896 BLKP51451 505 aa22.58■■□□□ 1.2
SYMPK-212ENST00000598896 NXPH1P58417 271 aa22.58■■□□□ 1.2
SYMPK-212ENST00000598896 IRF8Q02556 426 aa22.58■■□□□ 1.2
SYMPK-212ENST00000598896 IL27RAQ6UWB1 636 aa22.58■■□□□ 1.2
SYMPK-212ENST00000598896 PATE1Q8WXA2 126 aa22.58■■□□□ 1.2
SYMPK-212ENST00000598896 G3BP2Q9UN86 482 aaKnown RBP22.58■■□□□ 1.2
SYMPK-212ENST00000598896 ICKQ9UPZ9 632 aa22.58■■□□□ 1.2
SYMPK-212ENST00000598896 HEBP2Q9Y5Z4 205 aa22.58■■□□□ 1.2
SYMPK-212ENST00000598896 KCNE2Q9Y6J6 123 aa22.58■■□□□ 1.2
SYMPK-212ENST00000598896 SDK1Q7Z5N4 2213 aa22.57■■□□□ 1.2
SYMPK-212ENST00000598896 CAPN14A8MX76 684 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms