RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 SSTR1P30872 391 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 GABRA4P48169 554 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 RGS4P49798 205 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 HECTD2Q5U5R9 776 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 LRRC8EQ6NSJ5 796 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 PAQR3Q6TCH7 311 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 CAPN12Q6ZSI9 719 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 TMEM126BQ8IUX1 230 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 GPATCH11Q8N954 259 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 KIF18AQ8NI77 898 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 PKP4Q99569 1192 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 GPN2Q9H9Y4 310 aaPredicted RBP16.12■□□□□ 0.17
SSBP4-204ENST00000597724 NSMCE4AQ9NXX6 385 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 SERTAD3Q9UJW9 196 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 PADI1Q9ULC6 663 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 PCDHB3Q9Y5E6 796 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 PCDHGA4Q9Y5G9 962 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 A0A1W2PPV9 198 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 ESYT3A0FGR9 886 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 HCRTR1O43613 425 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 ZBTB14O43829 449 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 CCNYL3P0C7X3 344 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 FDXRP22570 491 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 GUCY2DQ02846 1103 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 FASTKQ14296 549 aaKnown RBP16.11■□□□□ 0.17
SSBP4-204ENST00000597724 ARHGAP19Q14CB8 494 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 FAM45BPQ6NSW5 357 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 C3orf62Q6ZUJ4 267 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 UBE2R2Q712K3 238 aaPredicted RBP16.11■□□□□ 0.17
SSBP4-204ENST00000597724 STRA8Q7Z7C7 330 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 ZC3HC1Q86WB0 502 aaKnown RBP16.11■□□□□ 0.17
SSBP4-204ENST00000597724 CCDC25Q86WR0 208 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 DNAJC22Q8N4W6 341 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 ZSCAN1Q8NBB4 408 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 SLC38A9Q8NBW4 561 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 NOA1Q8NC60 698 aaKnown RBP16.11■□□□□ 0.17
SSBP4-204ENST00000597724 OR2A1Q8NGT9 310 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 FAM45AQ8TCE6 357 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 KIAA1143Q96AT1 154 aaPredicted RBP16.11■□□□□ 0.17
SSBP4-204ENST00000597724 SLC45A3Q96JT2 553 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 MCMBPQ9BTE3 642 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 AKIRIN1Q9H9L7 192 aaPredicted RBP16.11■□□□□ 0.17
SSBP4-204ENST00000597724 LHX9Q9NQ69 397 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 SMYD2Q9NRG4 433 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 ZDHHC18Q9NUE0 388 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.11■□□□□ 0.17
SSBP4-204ENST00000597724 KLHL20Q9Y2M5 609 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 KALRNO60229 2985 aa16.11■□□□□ 0.17
SSBP4-204ENST00000597724 CTAGE15A4D2H0 777 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 H3BMH7 237 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 CPNE3O75131 537 aaKnown RBP16.1■□□□□ 0.17
SSBP4-204ENST00000597724 PIAS1O75925 651 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 SLC16A8O95907 504 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 C1QAP02745 245 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 GSTA2P09210 222 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 CTAGE8P0CG41 777 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 PSMB5P28074 263 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 HSD17B2P37059 387 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 MAGEA4P43358 317 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 PGGT1BP53609 377 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 ITGA1P56199 1179 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 GPX6P59796 221 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 RHDQ02161 417 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 PDAP1Q13442 181 aaKnown RBP16.1■□□□□ 0.17
SSBP4-204ENST00000597724 DEFB110Q30KQ9 67 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 PRAMEF17Q5VTA0 474 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 KIAA1614Q5VZ46 1190 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 FCRL6Q6DN72 434 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 FIGLAQ6QHK4 219 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 CTAGE6Q86UF2 777 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 CTAGE4Q8IX94 777 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 SMPDL3AQ92484 453 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 DLG3Q92796 817 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 ZUFSPQ96AP4 578 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 OLFM1Q99784 485 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 EFHD1Q9BUP0 239 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 SLC12A9Q9BXP2 914 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 INTS7Q9NVH2 962 aaKnown RBP16.1■□□□□ 0.17
SSBP4-204ENST00000597724 IL17BQ9UHF5 180 aa16.1■□□□□ 0.17
SSBP4-204ENST00000597724 DMGDHQ9UI17 866 aaKnown RBP16.1■□□□□ 0.17
SSBP4-204ENST00000597724 PCM1Q15154 2024 aa16.09■□□□□ 0.17
SSBP4-204ENST00000597724 TCRBV9S1A1TA0A576 114 aa16.09■□□□□ 0.17
SSBP4-204ENST00000597724 TERTO14746 1132 aaKnown RBP16.09■□□□□ 0.17
SSBP4-204ENST00000597724 TSPAN12O95859 305 aa16.09■□□□□ 0.17
SSBP4-204ENST00000597724 SYF2O95926 243 aaKnown RBP16.09■□□□□ 0.17
SSBP4-204ENST00000597724 CYP2A7P20853 494 aa16.09■□□□□ 0.17
SSBP4-204ENST00000597724 F8A1P23610 371 aa16.09■□□□□ 0.17
SSBP4-204ENST00000597724 GRIA3P42263 894 aa16.09■□□□□ 0.17
SSBP4-204ENST00000597724 PNLIPRP1P54315 467 aa16.09■□□□□ 0.17
SSBP4-204ENST00000597724 IL2P60568 153 aa16.09■□□□□ 0.17
SSBP4-204ENST00000597724 GLE1Q53GS7 698 aaKnown RBP16.09■□□□□ 0.17
SSBP4-204ENST00000597724 FAM199XQ6PEV8 388 aaPredicted RBP16.09■□□□□ 0.17
SSBP4-204ENST00000597724 SUSD1Q6UWL2 747 aa16.09■□□□□ 0.17
SSBP4-204ENST00000597724 GPR135Q8IZ08 494 aa16.09■□□□□ 0.17
SSBP4-204ENST00000597724 MYO1HQ8N1T3 1032 aa16.09■□□□□ 0.17
SSBP4-204ENST00000597724 OR2L3Q8NG85 312 aa16.09■□□□□ 0.17
SSBP4-204ENST00000597724 ZNF480Q8WV37 535 aa16.09■□□□□ 0.17
SSBP4-204ENST00000597724 CDKL2Q92772 493 aa16.09■□□□□ 0.17
SSBP4-204ENST00000597724 N4BP2L2Q92802 583 aaPredicted RBP16.09■□□□□ 0.17
SSBP4-204ENST00000597724 LINGO1Q96FE5 620 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms