RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 ETV4P43268 484 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 ZFP36L1Q07352 338 aaKnown RBP14.53□□□□□ -0.08
TRIM28-207ENST00000597136 GRB7Q14451 532 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 TMEM71Q6P5X7 295 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 SBSNQ6UWP8 590 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 ADAMTSL2Q86TH1 951 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 TBC1D21Q8IYX1 336 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 CACTIN-AS1Q8N1I8 211 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 ANKRD42Q8N9B4 389 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 OR5K2Q8NHB8 316 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 WDR48Q8TAF3 677 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 STAG3L4Q8TBR4 150 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 MDM1Q8TC05 714 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 ZFPM2Q8WW38 1151 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 DLG3Q92796 817 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 DEPDC7Q96QD5 511 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 NKIRAS1Q9NYS0 192 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 CPSF2Q9P2I0 782 aaKnown RBP14.53□□□□□ -0.08
TRIM28-207ENST00000597136 XPR1Q9UBH6 696 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 KLHL3Q9UH77 587 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 FER1L5A0AVI2 2057 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 OR6C74A6NCV1 312 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 TK2O00142 265 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 ZW10O43264 779 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 DUX1O43812 170 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 KERAO60938 352 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 PSIP1O75475 530 aaKnown RBP14.52□□□□□ -0.08
TRIM28-207ENST00000597136 C1orf105O95561 183 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 NDUFS1P28331 727 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 BDKRB1P46663 353 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 C16orf72Q14CZ0 275 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 PPP1R3AQ16821 1122 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 PHF19Q5T6S3 580 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 UBE2R2Q712K3 238 aaPredicted RBP14.52□□□□□ -0.08
TRIM28-207ENST00000597136 ARMC2Q8NEN0 867 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 LCN9Q8WX39 176 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 FOPNLQ96NB1 174 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 ATOH8Q96SQ7 321 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 SLC12A9Q9BXP2 914 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 TRIT1Q9H3H1 467 aaKnown RBP14.52□□□□□ -0.08
TRIM28-207ENST00000597136 HRASLS2Q9NWW9 162 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 ANGPTL2Q9UKU9 493 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 RNF112Q9ULX5 631 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 ICKQ9UPZ9 632 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 MSRB2Q9Y3D2 182 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 NEUROG3Q9Y4Z2 214 aa14.52□□□□□ -0.08
TRIM28-207ENST00000597136 ZFHX4Q86UP3 3567 aa14.52□□□□□ -0.09
TRIM28-207ENST00000597136 SCN2AQ99250 2005 aa14.52□□□□□ -0.09
TRIM28-207ENST00000597136 TRABD2BA6NFA1 517 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 BTN3A3O00478 584 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 SLC16A5O15375 505 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 CAPN5O15484 640 aaPredicted RBP14.51□□□□□ -0.09
TRIM28-207ENST00000597136 POLR2CP19387 275 aaPredicted RBP14.51□□□□□ -0.09
TRIM28-207ENST00000597136 INHBCP55103 352 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 WDR4P57081 412 aaKnown RBP14.51□□□□□ -0.09
TRIM28-207ENST00000597136 SHC2P98077 582 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 SP140Q13342 867 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 PHKG1Q16816 387 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 WDR74Q6RFH5 385 aaPredicted RBP14.51□□□□□ -0.09
TRIM28-207ENST00000597136 UNC5DQ6UXZ4 953 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 GPSM1Q86YR5 675 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 C2orf73Q8N5S3 287 aaPredicted RBP14.51□□□□□ -0.09
TRIM28-207ENST00000597136 OR4D9Q8NGE8 314 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 FAM76AQ8TAV0 307 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 MGARPQ8TDB4 240 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 CCDC74BQ96LY2 380 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 PPM1MQ96MI6 270 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 IL17FQ96PD4 163 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 TGM7Q96PF1 710 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 SRMSQ9H3Y6 488 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 CNOT10Q9H9A5 744 aaKnown RBP14.51□□□□□ -0.09
TRIM28-207ENST00000597136 PARVBQ9HBI1 364 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 PDE10AQ9Y233 779 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 SYCE1LA8MT33 242 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 ARHGEF33A8MVX0 844 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 G3V2L1 256 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 C9P02748 559 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 DHRS4L1P0CG22 281 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 MTHFD2P13995 350 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 HGFP14210 728 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 CAPZBP47756 277 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 ATP1A2P50993 1020 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 TGFBIQ15582 683 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 IRGCQ6NXR0 463 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 FAM92BQ6ZTR7 304 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 ADGRF3Q8IZF5 1079 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 ARFGAP2Q8N6H7 521 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 CCDC63Q8NA47 563 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 RDH11Q8TC12 318 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 MENTQ9BUN1 341 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 ZMYND15Q9H091 742 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 EPB41L1Q9H4G0 881 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 MLXIPLQ9NP71 852 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 PDP2Q9P2J9 529 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 OARD1Q9Y530 152 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 SCN3AQ9NY46 2000 aa14.51□□□□□ -0.09
TRIM28-207ENST00000597136 OR5K3A6NET4 321 aa14.5□□□□□ -0.09
TRIM28-207ENST00000597136 UBXN8O00124 270 aa14.5□□□□□ -0.09
TRIM28-207ENST00000597136 CATP04040 527 aaKnown RBP14.5□□□□□ -0.09
TRIM28-207ENST00000597136 ENO2P09104 434 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms