RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 ARL1P40616 181 aaPredicted RBP14.2□□□□□ -0.14
VRK3-212ENST00000596814 CCNG1P51959 295 aa14.2□□□□□ -0.14
VRK3-212ENST00000596814 CDC16Q13042 620 aa14.2□□□□□ -0.14
VRK3-212ENST00000596814 SHBQ15464 509 aa14.2□□□□□ -0.14
VRK3-212ENST00000596814 HLA-BQ31612 363 aa14.2□□□□□ -0.14
VRK3-212ENST00000596814 CGB2Q6NT52 195 aa14.2□□□□□ -0.14
VRK3-212ENST00000596814 GPRIN3Q6ZVF9 776 aa14.2□□□□□ -0.14
VRK3-212ENST00000596814 LRRC56Q8IYG6 542 aaPredicted RBP14.2□□□□□ -0.14
VRK3-212ENST00000596814 KIRREL3Q8IZU9 778 aa14.2□□□□□ -0.14
VRK3-212ENST00000596814 AVL9Q8NBF6 648 aa14.2□□□□□ -0.14
VRK3-212ENST00000596814 OR52B6Q8NGF0 335 aa14.2□□□□□ -0.14
VRK3-212ENST00000596814 ZFPM2Q8WW38 1151 aa14.2□□□□□ -0.14
VRK3-212ENST00000596814 ATP6V1E2Q96A05 226 aa14.2□□□□□ -0.14
VRK3-212ENST00000596814 SGPP1Q9BX95 441 aa14.2□□□□□ -0.14
VRK3-212ENST00000596814 XKR8Q9H6D3 395 aa14.2□□□□□ -0.14
VRK3-212ENST00000596814 SLC40A1Q9NP59 571 aa14.2□□□□□ -0.14
VRK3-212ENST00000596814 ABCF3Q9NUQ8 709 aa14.2□□□□□ -0.14
VRK3-212ENST00000596814 INTS7Q9NVH2 962 aaKnown RBP14.2□□□□□ -0.14
VRK3-212ENST00000596814 PNPOQ9NVS9 261 aa14.2□□□□□ -0.14
VRK3-212ENST00000596814 ZDHHC2Q9UIJ5 367 aa14.2□□□□□ -0.14
VRK3-212ENST00000596814 OR7A17O14581 309 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 YKT6O15498 198 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 DFNA5O60443 496 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 TGDSO95455 350 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 SHMT2P34897 504 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 RPL14P50914 215 aaKnown RBP14.19□□□□□ -0.14
VRK3-212ENST00000596814 PKNOX1P55347 436 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 SH3BP2P78314 561 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 HHEXQ03014 270 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 BNIP3Q12983 259 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 TRAF3Q13114 568 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 PLCL1Q15111 1095 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 PRAMEF13Q5VWM6 474 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 SUSD1Q6UWL2 747 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 AFAP1L2Q8N4X5 818 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 LMNTD1Q8N9Z9 388 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 OR2L8Q8NGY9 312 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 HMGCLL1Q8TB92 370 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 BCAS4Q8TDM0 211 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 LCN9Q8WX39 176 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 SMPDL3AQ92484 453 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 NRTNQ99748 197 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 TRIM55Q9BYV6 548 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 ARRDC1-AS1Q9H2J1 176 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 STN1Q9H668 368 aaKnown RBP14.19□□□□□ -0.14
VRK3-212ENST00000596814 NPHS2Q9NP85 383 aa14.19□□□□□ -0.14
VRK3-212ENST00000596814 NDUFAB1O14561 156 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 NOBOXO60393 691 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 CRCPO75575 148 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 ESRRBO95718 433 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 CER1O95813 267 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 SYPP08247 313 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 EPORP19235 508 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 PRDX3P30048 256 aaKnown RBP14.18□□□□□ -0.14
VRK3-212ENST00000596814 HK2P52789 917 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 MAZP56270 477 aaKnown RBP14.18□□□□□ -0.14
VRK3-212ENST00000596814 GPR18Q14330 331 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 THEMIS2Q5TEJ8 643 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 SYVN1Q86TM6 617 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 WDR75Q8IWA0 830 aaKnown RBP14.18□□□□□ -0.14
VRK3-212ENST00000596814 RBM12BQ8IXT5 1001 aaKnown RBP14.18□□□□□ -0.14
VRK3-212ENST00000596814 SLC25A45Q8N413 288 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 C2orf73Q8N5S3 287 aaPredicted RBP14.18□□□□□ -0.14
VRK3-212ENST00000596814 DCBLD1Q8N8Z6 715 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 LINC01555Q8NAE3 123 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 JPH3Q8WXH2 748 aaPredicted RBP14.18□□□□□ -0.14
VRK3-212ENST00000596814 THOC1Q96FV9 657 aaKnown RBP14.18□□□□□ -0.14
VRK3-212ENST00000596814 OR4K3Q96R72 315 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 MIPEPQ99797 713 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 ELAC2Q9BQ52 826 aaKnown RBP14.18□□□□□ -0.14
VRK3-212ENST00000596814 NUSAP1Q9BXS6 441 aaKnown RBP14.18□□□□□ -0.14
VRK3-212ENST00000596814 GAREM1Q9H706 876 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 TNFRSF12AQ9NP84 129 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 GPRC5BQ9NZH0 403 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 CABIN1Q9Y6J0 2220 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 CACNA1HO95180 2353 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 A0A1B0GTL3 188 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 TMEM233B4DJY2 109 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 ARHGAP33O14559 1287 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 FASLGP48023 281 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 CCT8P50990 548 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 GABPB1Q06547 395 aaPredicted RBP14.18□□□□□ -0.14
VRK3-212ENST00000596814 SF3A3Q12874 501 aaKnown RBP eCLIP14.18□□□□□ -0.14
VRK3-212ENST00000596814 C6orf132Q5T0Z8 1188 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 LAIR1Q6GTX8 287 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 LCTLQ6UWM7 567 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 SPATA21Q7Z572 469 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 AMIGO1Q86WK6 493 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 OR4F6Q8NGB9 312 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 ZNF473Q8WTR7 871 aaKnown RBP14.18□□□□□ -0.14
VRK3-212ENST00000596814 SH3KBP1Q96B97 665 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 CDK15Q96Q40 435 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 LRFN3Q9BTN0 628 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 NTMT1Q9BV86 223 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 PCBD2Q9H0N5 130 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 SRMSQ9H3Y6 488 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 OR6C2Q9NZP2 312 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 KLHL14Q9P2G3 628 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 ZNF225Q9UK10 706 aa14.18□□□□□ -0.14
VRK3-212ENST00000596814 FIS1Q9Y3D6 152 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms