RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 TMEM102Q8N9M5 508 aaPredicted RBP22.56■■□□□ 1.2
LSM4-204ENST00000594828 ZUFSPQ96AP4 578 aa22.56■■□□□ 1.2
LSM4-204ENST00000594828 ZNF669Q96BR6 464 aaPredicted RBP22.56■■□□□ 1.2
LSM4-204ENST00000594828 TRIM56Q9BRZ2 755 aaKnown RBP22.56■■□□□ 1.2
LSM4-204ENST00000594828 MLXIPLQ9NP71 852 aa22.56■■□□□ 1.2
LSM4-204ENST00000594828 NDOR1Q9UHB4 597 aa22.56■■□□□ 1.2
LSM4-204ENST00000594828 TSR3Q9UJK0 312 aaKnown RBP22.56■■□□□ 1.2
LSM4-204ENST00000594828 MATN4O95460 622 aa22.55■■□□□ 1.2
LSM4-204ENST00000594828 PKMP14618 531 aaKnown RBP22.55■■□□□ 1.2
LSM4-204ENST00000594828 ALAS2P22557 587 aa22.55■■□□□ 1.2
LSM4-204ENST00000594828 ATP5DP30049 168 aa22.55■■□□□ 1.2
LSM4-204ENST00000594828 ARSFP54793 590 aa22.55■■□□□ 1.2
LSM4-204ENST00000594828 FOXK1P85037 733 aa22.55■■□□□ 1.2
LSM4-204ENST00000594828 GBX1Q14549 363 aa22.55■■□□□ 1.2
LSM4-204ENST00000594828 SLC35F6Q8N357 371 aa22.55■■□□□ 1.2
LSM4-204ENST00000594828 HMGCLL1Q8TB92 370 aa22.55■■□□□ 1.2
LSM4-204ENST00000594828 ACTRT1Q8TDG2 376 aa22.55■■□□□ 1.2
LSM4-204ENST00000594828 DENND1AQ8TEH3 1009 aa22.55■■□□□ 1.2
LSM4-204ENST00000594828 COG1Q8WTW3 980 aa22.55■■□□□ 1.2
LSM4-204ENST00000594828 DLG3Q92796 817 aa22.55■■□□□ 1.2
LSM4-204ENST00000594828 SERPINB12Q96P63 405 aa22.55■■□□□ 1.2
LSM4-204ENST00000594828 OSBPL9Q96SU4 736 aa22.55■■□□□ 1.2
LSM4-204ENST00000594828 INTS10Q9NVR2 710 aaKnown RBP22.55■■□□□ 1.2
LSM4-204ENST00000594828 IL1RAPL1Q9NZN1 696 aa22.55■■□□□ 1.2
LSM4-204ENST00000594828 GALPQ9UBC7 116 aa22.55■■□□□ 1.2
LSM4-204ENST00000594828 PTRH2Q9Y3E5 179 aaKnown RBP22.55■■□□□ 1.2
LSM4-204ENST00000594828 KRT87PA6NCN2 255 aa22.54■■□□□ 1.2
LSM4-204ENST00000594828 TARM1B6A8C7 271 aa22.54■■□□□ 1.2
LSM4-204ENST00000594828 E5RI56 91 aa22.54■■□□□ 1.2
LSM4-204ENST00000594828 ZNF185O15231 689 aa22.54■■□□□ 1.2
LSM4-204ENST00000594828 ZSCAN12O43309 604 aa22.54■■□□□ 1.2
LSM4-204ENST00000594828 OTX2P32243 289 aa22.54■■□□□ 1.2
LSM4-204ENST00000594828 RRADP55042 308 aa22.54■■□□□ 1.2
LSM4-204ENST00000594828 ATP1A4Q13733 1029 aa22.54■■□□□ 1.2
LSM4-204ENST00000594828 THOC5Q13769 683 aaKnown RBP22.54■■□□□ 1.2
LSM4-204ENST00000594828 SLC9A5Q14940 896 aa22.54■■□□□ 1.2
LSM4-204ENST00000594828 NKAIN1Q4KMZ8 207 aa22.54■■□□□ 1.2
LSM4-204ENST00000594828 PAPD7Q5XG87 772 aaKnown RBP22.54■■□□□ 1.2
LSM4-204ENST00000594828 GRK7Q8WTQ7 553 aa22.54■■□□□ 1.2
LSM4-204ENST00000594828 IP6K3Q96PC2 410 aa22.54■■□□□ 1.2
LSM4-204ENST00000594828 G3BP2Q9UN86 482 aaKnown RBP22.54■■□□□ 1.2
LSM4-204ENST00000594828 SEC16AO15027 2179 aa22.53■■□□□ 1.2
LSM4-204ENST00000594828 GOLGA6L10A0A0M3HER8 536 aa22.53■■□□□ 1.2
LSM4-204ENST00000594828 CTAGE9A4FU28 777 aa22.53■■□□□ 1.2
LSM4-204ENST00000594828 PHF2O75151 1096 aa22.53■■□□□ 1.2
LSM4-204ENST00000594828 SNRNP200O75643 2136 aaKnown RBP22.53■■□□□ 1.2
LSM4-204ENST00000594828 CEACAM4O75871 244 aa22.53■■□□□ 1.2
LSM4-204ENST00000594828 FOLR3P41439 243 aa22.53■■□□□ 1.2
LSM4-204ENST00000594828 ACSBG2Q5FVE4 666 aa22.53■■□□□ 1.2
LSM4-204ENST00000594828 ZNF470Q6ECI4 717 aa22.53■■□□□ 1.2
LSM4-204ENST00000594828 TTLL10Q6ZVT0 673 aa22.53■■□□□ 1.2
LSM4-204ENST00000594828 MIPEPQ99797 713 aa22.53■■□□□ 1.2
LSM4-204ENST00000594828 GRPEL1Q9HAV7 217 aa22.53■■□□□ 1.2
LSM4-204ENST00000594828 SPATA7Q9P0W8 599 aa22.53■■□□□ 1.2
LSM4-204ENST00000594828 ZCWPW2A0A1B0GU75 182 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 A6NL46 340 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 PSMB5P28074 263 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 GCGRP47871 477 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 FNTAP49354 379 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 MLLT10P55197 1068 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 CTBP1Q13363 440 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 CYP2A13Q16696 494 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 KLHL38Q2WGJ6 581 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 TCTE1Q5JU00 501 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 MRPL14Q6P1L8 145 aaKnown RBP22.52■■□□□ 1.2
LSM4-204ENST00000594828 NAT8LQ8N9F0 302 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 FDCSPQ8NFU4 85 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 OR2L3Q8NG85 312 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 OR2A1Q8NGT9 310 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 OR9A1PQ8NGU1 263 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 OR2Y1Q8NGV0 311 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 PTERQ96BW5 349 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 SELENOSQ9BQE4 189 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 ZNF451Q9Y4E5 1061 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 PCDHGB7Q9Y5F8 929 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 MAD1L1Q9Y6D9 718 aa22.52■■□□□ 1.2
LSM4-204ENST00000594828 KIF5CO60282 957 aa22.51■■□□□ 1.19
LSM4-204ENST00000594828 SRPX2O60687 465 aaPredicted RBP22.51■■□□□ 1.19
LSM4-204ENST00000594828 USP1O94782 785 aa22.51■■□□□ 1.19
LSM4-204ENST00000594828 MAGEA3P43357 314 aa22.51■■□□□ 1.19
LSM4-204ENST00000594828 GRM7Q14831 915 aa22.51■■□□□ 1.19
LSM4-204ENST00000594828 YOD1Q5VVQ6 348 aaPredicted RBP22.51■■□□□ 1.19
LSM4-204ENST00000594828 MRGPREQ86SM8 312 aa22.51■■□□□ 1.19
LSM4-204ENST00000594828 DENND6AQ8IWF6 608 aa22.51■■□□□ 1.19
LSM4-204ENST00000594828 SIGLEC10Q96LC7 697 aa22.51■■□□□ 1.19
LSM4-204ENST00000594828 CCDC68Q9H2F9 335 aa22.51■■□□□ 1.19
LSM4-204ENST00000594828 FBXO6Q9NRD1 293 aaPredicted RBP22.51■■□□□ 1.19
LSM4-204ENST00000594828 CUTCQ9NTM9 273 aa22.51■■□□□ 1.19
LSM4-204ENST00000594828 SNX12Q9UMY4 172 aa22.51■■□□□ 1.19
LSM4-204ENST00000594828 PLAAQ9Y263 795 aa22.51■■□□□ 1.19
LSM4-204ENST00000594828 KLK4Q9Y5K2 254 aa22.51■■□□□ 1.19
LSM4-204ENST00000594828 MYO18BQ8IUG5 2567 aa22.51■■□□□ 1.19
LSM4-204ENST00000594828 A0A1B0GX78 115 aa22.5■■□□□ 1.19
LSM4-204ENST00000594828 A0A1W2PPV9 198 aa22.5■■□□□ 1.19
LSM4-204ENST00000594828 PEX12O00623 359 aa22.5■■□□□ 1.19
LSM4-204ENST00000594828 CES2O00748 559 aa22.5■■□□□ 1.19
LSM4-204ENST00000594828 CTSVO60911 334 aa22.5■■□□□ 1.19
LSM4-204ENST00000594828 CNOT3O75175 753 aaKnown RBP22.5■■□□□ 1.19
LSM4-204ENST00000594828 PSIP1O75475 530 aaKnown RBP22.5■■□□□ 1.19
LSM4-204ENST00000594828 F7P08709 466 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms